Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01590 ATGTACATTATTCTTAAGTTCTACTTCAAAAGAGTTCATCCAAACACTTcaacaacaataacaacaaaaataaaaaacaTGAATTCATTACCTTCTGATGCTTTCAACATGAGAGTCACAGAGGAAGATACTAATCAAACAGAGAGGTCTCAATGGATTCTGAATTCTCCAAATCCACCACCTCTATGGAAAAAGCTAATTAGTCCACTAAAAAATAAGAAGCACTTTTTTTCATCCAAAAACAGAACTTGCAATGAACATGCTTTTTCTTTCATTGGAAATTTATTTCCAATACTTAGCTTGTTCAAAAATTATGATGCTTTCAAGTTTAAAGATGATTTTCTAGCAGGTTTAACTCTTGCTAGCCTTAGCATACCACAGAGTATAGGATATGCTAATTTAGCAAGACTTGATCCTCAATATGGCTTATATACTAGTGTGGTTCCTCCTCTTATCTATGCTGTGATGGGAAGTTCAAGAGAAATTGCAATTGGACCAGTAGCAGTTGTGTCACTGCTACTATCCTCTCTATGTCAGAAAGTGGTTGATCCAGTTGCACATCATGATGACTACAGAAATTTTGTTTTTACTGTAACATTATTTGCTGGAATCTTTCAAGTTGCATTTGGAGTTTTCAGGTTGGGGTTTCTTGTGGATTTCCTTTCACATGCTGCACTTGTAGGATTCATGGCAGGTGCAGCTATCATAATTGGTCTTCAACAGCTTAAGGGGTTGCTTGGGATTAGTAACTTTACCAAAAAATCTGATGTTGTTTCTGTTGTGGAATCTGTTTATAAGTCACTTCATCACCAAATTCCATCTGGAGAATGGTACCCTCTGAATTTTGTCATTGGAAGTTCATTCCTGATTTTCCTTTTGATTGCAAGATTTATGGGCAAAAGAAACAAAAAGCTATTCTGGTTGCCAGCTATTGCTCCTCTTGTATCAGTTATACTATCAACTTTTATTGTGTATATATCAAAAGCTGATAAAAATGGGGTTAATATAGTAACACATGTCAAAAGAGGCCTTAATCCAACCTCAGTTCACCAATTACAACTCAATGGTCCACATGTTGGTCAAGCAGCTAAAATTGGATTGATTTCTGCTGTTATTGCTCTCACTGAAGCAATGGCTGTTGGTAGATCATTTGCTTCAATTAAAGGATACCATCTTGATGGGAACAAAGAAATGTTAGCAATGGGTTGTATGAACATTGCAGGATCTTTCACTTCATGTTATGTTGCAACTGGTTCATTTTCAAGGACTGCAGTAAATTTCAGTGCAAGATGTCAATCATCAATATCAAATATTGTGATGGCAGTAACAGTGATTCTGTGCTTGGAGTTGTTTACAAGACTCTTATATTATACACCTATGGCTATACTTGCTTCTATAATCCTTTCTGCACTTCCAGGATTAATTGACATAAGAGAAGCTTGTTACATTTGGAAGGTTGACAAAGTTGACTTTCTTGCTTGCATTGGTGCTTTCTTTGGTGTCTTGTTTGTATCGGTAGAAACTGGTCTTATTGTTGCAGTGTCAATCTCATTTGGAAAGATAGTAATACAATCAATTAGACCAGGGATAGAAGTTCTAGGTAGAATTCCTAGAACAGAAGCATTTTGTGATGTTAGTCAATATCCCATTGCTACAAGCACTCCAGGCATTTTGGTGATTCGAATAAGCTCTGGCTCACTCTGCTTTGCAAATTCCAATGTTGTTAGAGAAAGAATACTCAAGTGGATCACTCAAGAAGATGAGCTTAAAGAAACTACTAAGGGAAGAGTCCAAGCAGTAATATTGGACATGACTAATTTGATGAATGTTGATACTTCTGGAATTATAATACTAGAGGAACTGCACAAGAGGTTGCTCTCGCGTGGCATAAAATTTGCAATGGTGAACCCAAGGTGGCTAGTAATTCACAAGCTTAAAGTGGCAAACTTTGTGGATAAAATTGGGAAAGAATGGGTTTTCCTTACTGTTGGTGAAGCCATGGATGCATGCCTGTCTTATAAATTCGCTGACCCATGA 2037 0.3633 MYIILKFYFKRVHPNTSTTITTKIKNMNSLPSDAFNMRVTEEDTNQTERSQWILNSPNPPPLWKKLISPLKNKKHFFSSKNRTCNEHAFSFIGNLFPILSLFKNYDAFKFKDDFLAGLTLASLSIPQSIGYANLARLDPQYGLYTSVVPPLIYAVMGSSREIAIGPVAVVSLLLSSLCQKVVDPVAHHDDYRNFVFTVTLFAGIFQVAFGVFRLGFLVDFLSHAALVGFMAGAAIIIGLQQLKGLLGISNFTKKSDVVSVVESVYKSLHHQIPSGEWYPLNFVIGSSFLIFLLIARFMGKRNKKLFWLPAIAPLVSVILSTFIVYISKADKNGVNIVTHVKRGLNPTSVHQLQLNGPHVGQAAKIGLISAVIALTEAMAVGRSFASIKGYHLDGNKEMLAMGCMNIAGSFTSCYVATGSFSRTAVNFSARCQSSISNIVMAVTVILCLELFTRLLYYTPMAILASIILSALPGLIDIREACYIWKVDKVDFLACIGAFFGVLFVSVETGLIVAVSISFGKIVIQSIRPGIEVLGRIPRTEAFCDVSQYPIATSTPGILVIRISSGSLCFANSNVVRERILKWITQEDELKETTKGRVQAVILDMTNLMNVDTSGIIILEELHKRLLSRGIKFAMVNPRWLVIHKLKVANFVDKIGKEWVFLTVGEAMDACLSYKFADP 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01590 678 ProSitePatterns SLC26A transporters signature. 139 160 IPR018045 GO:0008271|GO:0008272
Car05g01590 678 TIGRFAM sulP: sulfate permease 97 666 IPR001902 GO:0015301|GO:0016020|GO:0055085
Car05g01590 678 Pfam Sulfate permease family 110 495 IPR011547 GO:0016021
Car05g01590 678 PANTHER SULFATE TRANSPORTER 38 677 IPR001902 GO:0015301|GO:0016020|GO:0055085
Car05g01590 678 Gene3D STAS domain 527 673 IPR036513 -
Car05g01590 678 ProSiteProfiles STAS domain profile. 564 670 IPR002645 -
Car05g01590 678 PANTHER SLC26A/SULP TRANSPORTER-RELATED 38 677 - -
Car05g01590 678 CDD STAS_SulP_like_sulfate_transporter 548 663 - -
Car05g01590 678 Pfam STAS domain 548 666 IPR002645 -
Car05g01590 678 SUPERFAMILY SpoIIaa-like 551 670 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01590 Car-Chr5 60521756 60527774 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01590 11 674 Inorganic Solute Cotransporters AT5G10180 59.287 0.0 799
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01590 K17469 - gmx:100805269 1032.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g01079 02 28485344 28489808 Car05g01590 05 60521756 60527774 PCT