Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01588 atGGTACCGTGGAATACTCCGTGTGCAGCGTGCAAGATTCAGCGTCGAAAATGCACAGAGGAATGTGTGTTTGCGCCGTATTTTCCGCCGGACAATCCTCAAAAGTTTGCGTACGTACACAAAGTGTTCGGCGCTAGCAACGTTGCAAAGCTATTGAATGAGGTGAACGCTTCACAGCGTGAAGACGCCGTTAAGTCACTCGCTTATGAAGCCGAAGCTCGTTTAAGAGACCCTGTTTATGGTTGTGTTGGTCTTATTTCACTCCTTCAACATAACCTTAAATCCTTGCAAATTGAACTTAATAACGCTAAGAAAGAACTCGCTTCTTTTATTGGTCCTCAAGTTATGCTTCCTCCATCACCACCGCCGCCGCCACTACTATCTTCACCGCCGCCGCCTAATTCTTTTTTTCCTTCTTCTCAACGTCAAGAACTTTTCACCTTCAATATCGAACCACcttctgcttcttcttcttcttcttcttcttcACACGTGTCGTTTCCTttctcttcttcttctacttcttctCAGTTTCAAATTCACCCTTTTCACAATCAATTAATGCTTTCATCATCACAGAAACAACAACCCAACCATTCGTTTTTCTCCCAGAAGATGTTCAAGTCGGAAAGAGCAAATCTTGAAGAGGGTGCCGGTGGGGCTTAA 666 0.4114 MVPWNTPCAACKIQRRKCTEECVFAPYFPPDNPQKFAYVHKVFGASNVAKLLNEVNASQREDAVKSLAYEAEARLRDPVYGCVGLISLLQHNLKSLQIELNNAKKELASFIGPQVMLPPSPPPPPLLSSPPPPNSFFPSSQRQELFTFNIEPPSASSSSSSSSHVSFPFSSSSTSSQFQIHPFHNQLMLSSSQKQQPNHSFFSQKMFKSERANLEEGAGGA 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01588 221 MobiDBLite consensus disorder prediction 115 134 - -
Car05g01588 221 Pfam Lateral organ boundaries (LOB) domain 7 104 IPR004883 -
Car05g01588 221 MobiDBLite consensus disorder prediction 186 221 - -
Car05g01588 221 Coils Coil 86 106 - -
Car05g01588 221 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 5 196 - -
Car05g01588 221 MobiDBLite consensus disorder prediction 186 207 - -
Car05g01588 221 MobiDBLite consensus disorder prediction 114 134 - -
Car05g01588 221 PANTHER LOB DOMAIN-CONTAINING PROTEIN 32-RELATED 5 196 - -
Car05g01588 221 ProSiteProfiles LOB domain profile. 6 107 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01588 Car-Chr5 60487178 60488630 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01588 1 147 AS2 family AT5G66870 67.347 3.19e-64 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Car05g01588 LOB 6.7e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01588 - - gmx:100812543 209.149