Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01582 ATGGACATATACGAGCCATTCCAGCAAGTTAGCATGTGGGGTGATAGCTTTAAAGTTGAAGGTGGATTGAATTCAATTGCTTCCCCAATGTTACTGGTCAACACTAGCATGGAGAACAAGTCTGAATTTATTCCTCATGAACCAAGGGACTCTTCTGGAGCTGATCAAGAGACTACAAATAAAGATGATAGTAAGGTGCTACGGCGCCTCGCTCAAAATCGAGAGGCTGCTCGGAAAAGTCGGTTGCGCAAAAAGGCTTATGTTCAGCAATTGGAAACAAGCAGATTGAAGCTCATGCAATTGGAGATTGAGATTGGGAGAGCAAGAAAGCAGGGTATGTACACTGGAAATGCATTAGATACCAGTTTTATGGGATCATCTGAAACAATAAACCCAGGAGTTGTTGCGTTTGAAATTGAATATGGAAATTGGGTTGAAGAGCAACATAGGTGGAACGAAGAACTCAGAAATGCATTTCAAACGAACGCGTCTGAAGTGCAGCTCCATCTAGTTGTTCAGAGTGTTTTGAATCATTACTCGGATCTTTTTCGAATGAAAGCAGATGCTGCAAAGGCTGATGTCCTCTATTTAATCTCTGGTGTGTGGAAAACATCATTAGAGCGCCTTTTCCTATGGATCGGAGGATCACGCCCGTCACAGCTTCTAAATCTCATTCTACCACAACTTGAGCCTTTGACTGATCAACAAATTGCTAGCATTAACAAACTTCGTCTATCGTCTCAACAAGCTGAAGATGCTCTTTCACAAGGACTGGATAAACTCCAGCAGAGTCTGGTCCAAGACATGGCAGTTGATCCATTAACTGCAGCAAATCATGGATTTCAGATGGCTATTGCTTTAGAGAAATTTGAGGGACTAGAAGGTTTTGTAAGCCAGGCAGATCACCTTAGGCAGCAAACTCTGATACACATGTCACGAATCCTGTCAACTCACCAAGCTGCTAGGGGCTTGCTTGCTCTTGGAGAATACTTCCATCGTCTTCGAACTCTTTGTTCTCTTTGGACTTCTCGTCCATGTGACTCCATCATACACCAATTTCGATTGAGGGCTTCGTTTTGGAACCCTAATTCCAAGCCCCTTTTGCAATCTTCTTTGTTGTATTCTACATGGCTCGTTTCTTCGGGTTCGAGCAGACCCATGGCACGGTTTCGTTTGAATCAGAAGAGAACTGTGACGAAAGCATCAAATTGGGATGAACAAAAGTCCCCATATGAAACTCTTGAATTGGAAGGAGATGCTGATGACGAGCAGATAAAGATTGCTTATAGACGTTTGGCCAAATTTTATCATCCAGATGTCTATAATGGAAGAGGAACCCTTGAGGAAGGTGAAACAGCAGAAGCTAGGTTCATCAAGATTCAAGCTGCTTATGAATTGCTTATAGATGCAGAGAGGAGAAGACAGTATGACATGGACAACCGGGTCAACCCTCTGAAGGCATCTCAAGCATGGATGGATTGGCTTATGAAAAAACGAAAAGCTTTTGATCAGCGGGGTGATATGGCAATTGCTGCTTGGGCAGAACAGCAACAGCGCGAGTTGAATATTCGCGTGCGTCAACTTTCCCGTTCAAAGATTGATCCAGATGAAGCAAGGAAGATTCTAGCAAGAGAAAAGAAGGCTTCAGCTGAATATTTCAGCAATACCCTTAAAAGGCACACACTTATACTGAAGAAGAGAGATTTAATGCGAAAAAAGGCAGAGGAAGATAAGAAGAAGACTATCAGCCAGCTCTTAGCCGCAGAAGGTCTTGAGCTTGATACTGATAGTGATGAAGCATTGTAG 1806 0.4302 MDIYEPFQQVSMWGDSFKVEGGLNSIASPMLLVNTSMENKSEFIPHEPRDSSGADQETTNKDDSKVLRRLAQNREAARKSRLRKKAYVQQLETSRLKLMQLEIEIGRARKQGMYTGNALDTSFMGSSETINPGVVAFEIEYGNWVEEQHRWNEELRNAFQTNASEVQLHLVVQSVLNHYSDLFRMKADAAKADVLYLISGVWKTSLERLFLWIGGSRPSQLLNLILPQLEPLTDQQIASINKLRLSSQQAEDALSQGLDKLQQSLVQDMAVDPLTAANHGFQMAIALEKFEGLEGFVSQADHLRQQTLIHMSRILSTHQAARGLLALGEYFHRLRTLCSLWTSRPCDSIIHQFRLRASFWNPNSKPLLQSSLLYSTWLVSSGSSRPMARFRLNQKRTVTKASNWDEQKSPYETLELEGDADDEQIKIAYRRLAKFYHPDVYNGRGTLEEGETAEARFIKIQAAYELLIDAERRRQYDMDNRVNPLKASQAWMDWLMKKRKAFDQRGDMAIAAWAEQQQRELNIRVRQLSRSKIDPDEARKILAREKKASAEYFSNTLKRHTLILKKRDLMRKKAEEDKKKTISQLLAAEGLELDTDSDEAL 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01582 601 SMART brlzneu 61 121 IPR004827 GO:0003700|GO:0006355
Car05g01582 601 PRINTS DnaJ domain signature 452 472 IPR001623 -
Car05g01582 601 PRINTS DnaJ domain signature 498 517 IPR001623 -
Car05g01582 601 PRINTS DnaJ domain signature 411 429 IPR001623 -
Car05g01582 601 PRINTS DnaJ domain signature 429 444 IPR001623 -
Car05g01582 601 PANTHER TRANSCRIPTION FACTOR TGA9 1 497 - -
Car05g01582 601 Coils Coil 84 111 - -
Car05g01582 601 MobiDBLite consensus disorder prediction 42 64 - -
Car05g01582 601 Pfam bZIP transcription factor 64 93 IPR004827 GO:0003700|GO:0006355
Car05g01582 601 Gene3D - 64 114 - -
Car05g01582 601 Gene3D DnaJ domain 394 494 IPR036869 -
Car05g01582 601 Pfam DnaJ domain 410 477 IPR001623 -
Car05g01582 601 ProSitePatterns Nt-dnaJ domain signature. 457 476 IPR018253 -
Car05g01582 601 ProSiteProfiles dnaJ domain profile. 409 480 IPR001623 -
Car05g01582 601 SUPERFAMILY Chaperone J-domain 343 476 IPR036869 -
Car05g01582 601 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 68 83 IPR004827 GO:0003700|GO:0006355
Car05g01582 601 CDD DnaJ 410 469 IPR001623 -
Car05g01582 601 Pfam Seed dormancy control 153 226 IPR025422 GO:0006351|GO:0043565
Car05g01582 601 SMART dnaj_3 408 472 IPR001623 -
Car05g01582 601 PANTHER FACTOR TGA7, PUTATIVE-RELATED 1 497 - -
Car05g01582 601 SUPERFAMILY Leucine zipper domain 65 97 IPR046347 GO:0003700|GO:0006355
Car05g01582 601 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 63 98 IPR004827 GO:0003700|GO:0006355
Car05g01582 601 ProSiteProfiles DOG1 domain profile. 134 344 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01582 Car-Chr5 60404485 60411423 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01582 1 345 Calmodulin-binding Proteins AT1G22070 55.313 8.91e-128 379
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Car05g01582 DOG1 2e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01582 K14431 - gmx:100794268 556.984