Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01569 ATGGATACTAAGAAGCTTCGAAGAAAACCAAAACTCGAACGCCGTAATGCTATCAAGTACTTCGATTACGACGCTGGACCGTCTTCATCTTCGTTCGATGACTCTTCTGGTTCGCTCTACACTCGTTCCATGGAGTTATACGATCGTTCCAGCTTCCGTATTGAAGGAGTCGAAGGAGAATTGGATCGAATTTCCATGAAGATTCGATTCTCGGAAGATTTTCTTCCGAATTTGAAGCTCGAAGAGCTTGATGTTCAACGGAAGGTAAACGAAGTTAGAAATTCAGTGGAGGATGGTGAATTGACTGAGAAATTTGAAGATAGAGATAGGGTTAGAGTTATAGACGAGGTTGTTGATACtgttgttgctgttggtagtggtggtgatggtgggggtATAAATGGAATTCGTCCACCGATGCTTAAGCCGCCGCCAGGGATGAGAGTTCCGGTTGTTGATAACACTTGTTCAACTTGGGACCTTTTGAAGGAATTGGCTCCTGTAAGGGAAGAAGAGATTTTGAACGATGAGCGGGTAGTCGTGGAGAAAGAAGGTGAGGAGGTTGGTAGGGTAAGTTTGAAGAGAAAAGAGGAGGTTGTGGATAATGCGGAGATTGTTGCTGAATTTTCGGAATCATGTTCGTTTACTACTCCTAATGGGATAAATAAGCGCGTTATTACTCCTCGTTGCTGGCAAAAGGGTGGGTTTTTGGGGGGTGGTTCTTTTGGATCTGTTTATGAAGGAATTTCTGACGACGGAATCTTTTTTGCTGTAAAAGAAGTTTCATTGCTTGATCAAGGGGATCAGGGAAAGCAAAGTGTCTATCAACTGGAGCAGGAAATTGCACTTTTGAGTCGTTTTGAACATGATAATATAGTTCAATACTATGGCACTGAAATGGATGAATCCAAGCTGTATATCTTTATTGAACTTGTAACCAAAGGTTCTCTCAGAAGCCTCTACCAAAAGTACACTCTTCGAGATTCCCAAGTATCTGCCTATACAAGACAGATTCTGCAGGGTTTGAAGTATCTCCATGACCAAAATGTGGTTCACAGGGATATCAAATGTGCAAATATATTGGTGCATGCAAGTGGATCTGTCAAACTTGCAGATTTTGGGTTAGCAAAGGCAACCACATTGAATGATGTTAAATCATGCAAGGGGACAGCATTCTGGATGGCCCCTGAGGTTGTGAAAGGAAAGAACAAAGGTTATGGGCTTCCAGCTGATGTTTGGAGTCTGGGATGCACTGTCCTGGAGATGCTAACGGGCCAAATTCCATACTTCAATTTGGAATGTATGCAGGCAATATTTAGAATTGGAAAAGGTGAGCGACCTCCTATTCCTGATTCTCTTTCAAGAGATGCAAAAGACTTTATCATGCAGTGCCTTCAAGTTAATCCTGATGATCGTCCTACTGCTGCTCAACTCTTAAACCATCCATTTGTCCAACGGCCACTTTCCCAGTCTTCATCTCCATATGTTCATGGCAGAAAGGGTTAA 1506 0.4137 MDTKKLRRKPKLERRNAIKYFDYDAGPSSSSFDDSSGSLYTRSMELYDRSSFRIEGVEGELDRISMKIRFSEDFLPNLKLEELDVQRKVNEVRNSVEDGELTEKFEDRDRVRVIDEVVDTVVAVGSGGDGGGINGIRPPMLKPPPGMRVPVVDNTCSTWDLLKELAPVREEEILNDERVVVEKEGEEVGRVSLKRKEEVVDNAEIVAEFSESCSFTTPNGINKRVITPRCWQKGGFLGGGSFGSVYEGISDDGIFFAVKEVSLLDQGDQGKQSVYQLEQEIALLSRFEHDNIVQYYGTEMDESKLYIFIELVTKGSLRSLYQKYTLRDSQVSAYTRQILQGLKYLHDQNVVHRDIKCANILVHASGSVKLADFGLAKATTLNDVKSCKGTAFWMAPEVVKGKNKGYGLPADVWSLGCTVLEMLTGQIPYFNLECMQAIFRIGKGERPPIPDSLSRDAKDFIMQCLQVNPDDRPTAAQLLNHPFVQRPLSQSSSPYVHGRKG 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01569 501 PRINTS Tyrosine kinase catalytic domain signature 410 432 IPR001245 GO:0004672|GO:0006468
Car05g01569 501 PRINTS Tyrosine kinase catalytic domain signature 453 475 IPR001245 GO:0004672|GO:0006468
Car05g01569 501 PRINTS Tyrosine kinase catalytic domain signature 344 362 IPR001245 GO:0004672|GO:0006468
Car05g01569 501 PRINTS Tyrosine kinase catalytic domain signature 309 322 IPR001245 GO:0004672|GO:0006468
Car05g01569 501 Pfam Protein kinase domain 233 484 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g01569 501 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 4 72 - -
Car05g01569 501 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 78 493 - -
Car05g01569 501 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 4 72 - -
Car05g01569 501 ProSiteProfiles Protein kinase domain profile. 231 484 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g01569 501 ProSitePatterns Serine/Threonine protein kinases active-site signature. 350 362 IPR008271 GO:0004672|GO:0006468
Car05g01569 501 ProSitePatterns Protein kinases ATP-binding region signature. 237 259 IPR017441 GO:0005524
Car05g01569 501 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 78 493 - -
Car05g01569 501 Gene3D Transferase(Phosphotransferase) domain 1 231 498 - -
Car05g01569 501 SUPERFAMILY Protein kinase-like (PK-like) 221 489 IPR011009 -
Car05g01569 501 SMART serkin_6 231 484 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01569 Car-Chr5 60258464 60266470 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01569 133 488 MAP Kinase Kinase Kinase AT4G08500 59.043 9.84e-143 421
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Car05g01569 Pkinase 5.2e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01569 K13414 - gmx:100819999 668.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01569 05 60258464 60266470 Car05g01569 05 60258464 60266470 ECH