Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01562 ATGTCGACTGCCATTGACAAGCGTGGACCTTACACTGCCCTTGATCAATACGGCGTCGTTCACACCTTTAATACAAATCCGAAAACTCCACTACTATTTGATTACTCAAACGAAGATGAAAATAATAAGTATTTGAAATTGATGAAAGACATAATTTTAAAAGGAAAATCCGAAGTAGAACCCTCAGTGTTAGATCCTCGCGATGAAGGAACTTCAGATCACTGGATCCAACGAAACGCATCCTTATTGCGTCTCACTGGAAAACACCCTTTCAACTCAGAGCCACCACTACAAACCCTCATGCACCACGGTTTCATAACCCCCGCTCAACTCCACTACGTTCGCAATCACGGACCCGTTCCCAAGGCCCAATGGGACGATTGGACCGTCGAAGTAACGGGTCTCGTCAAACACCCGACCCAATTCACAATGGACCAACTAATCCACGACTTCCCCAGCCGCGAATTCCCTGTTACGCTCGTTTGTTCCGGAAATCGCCGCAAGGAACATAATATGGTGAAACAGACTATTGGCTTTAACTGGGGCCCATCTGCCACGTCAACTTCCTTGTGGCGCGGTGTACCGTTGAGGAAAGTGCTCAAGCGCTGTGGAATCTTTAACCGTAACAGTGGGGCCCTCTTTGTTTGCTTCGAAGGCGCTGAAGAACTGCCAGGTGGCGGTGGATCTAAATACGGAACCAGTATCATGAGCGAGGTTGCACTTGATCGCACCCGCGATATCATTCTTGCTTATTTGCAAAACGGTGAAGTTTTAGCTCCTGATCATGGTTATCCTGTACGAGTGATTGTACCTGGTTTCACTGCAGGACGCATGGTGAAATGGTTGAAGCGAATTATTGTGACAACCAAAGAATCTGATAGCTATTATCATTATCATGATAACAGAACACTTCCCTCTCATGTTGATGCTGAGCTTGCCAATGCAGAAGCGTGGTTCTACAAGCCGGAGTATATTATCTACGAGTTGAACATAAACTCCCTAATAACCACGCCGTGCCATGGTGAGATATTGCCCGTTAACTCAAACACTATTCAGAGGCCTTATATACTAAGAGGCTATGCATATTCGGGGGGTGGGAGAAAGGTGACAAGAGTTGAGGTGACGATGGACGGAGGTGAAACTTGGCGGGTATGCAGATTGGAGCATACAGAGAAACCGAACAAATACGGTAAGCACTGGTGTTGGTGCTTCTGGTCGTTGGAGGTTGAAGTTTTAGACTTGTTTGGAGCAAAAGAAATTGCGGTGCGTGCGTGGGATCTTGCTCTCAACACCCAGCCAGAGAATCTCAATTGGAATCTTATGGGCATGATGAACAACTGTTGGTTCAGAGTGAAAACAAACGTGTACAAACCTCAAAAGGGAGAGATTGGCATAATGTTTGAGCACCCAACCCAACCAGGAAACCAATCTGGTGGTTGGATGGTCAAACAAAAAGAACAACCACTCCCAACCCCCAACAACAATATTATTGTTTCTTCCTCACACCACACTACAACCTCAAAAATATACACCATGTCTGAGGTGAAAAAACATAACAACTCCGAATCAGCTTGGATTGTCGTTAACGGTCACATCTACGATTGCACCACCTACCTCAAAGACCATCCTGGGGGTGTCGATAGCATTCTTATCAACGCTGGCACTGATTGTACAGAGGAATTTGAAGCCATCCATTCTGATAAAGCAAAGAAAATGCTTAACGATTACTTAATCGGAGAGCTTCTTGTAACTGCCGACATCAATAACAATAATAGTGACGTCATCAAGGAAGTTACAAAAATTCATAATAATAATATGGCTCTAATTAACCCACGTGAGAAAATTCCATGTAAGCTAGTGTCAAAAAAATCAATCTCTCACAATGTTAGAATCTTCCGTTTTGCTTTACCTTATGAGGACCAACTCTTGGGTTTACCAACTGGGAAGCACTTATATGTATGTGCCACTATTGATGAGAAGCTTTGCATGCGAGCTTTTACACCAACGAGCGGTGTAGATGAAGTTGGATATTTTGATCTAGTGGTTAAGATTTATTTCAAAGGGGTGCATCCTAAGTTCCCTAACGGTGGATTAATGTCTCAACATTTAGATTCGTTGCCTATTGGTTCGAGTTTGGATTTTAAGGGCCCATTGGGCCACATAGAGTATATTGGTAAAGGAAATTTTATGGTTAGTGGGAAAAACAAATTTGCAAAGAGGTTAGTTATGTTGGCTGGTGGGACCGGGATAACACCTATTTACCAAGTGGTTCAAGCGATTTTAAAAGATGAAGAGGATTTGACTGAAATGTATGTTGTGTATGCTAATAAAACTGAGGATGATATATTGTTGAGGGAAGATCTTGATGTGTGGGCTAAGAAGTATGAAAGGTTCAAAGTGTGGTATGTGGTGCAAGAAAGTAAAAGAGAAGGGTGGGAATATAGTGTGGGGTTCATCACGGAAAGTATGTTGAAGAAACATGTTCCAGAAGCATCGGTTGATACGCTGGCATTGGCATGTGGCCCACCACCTATGATTCAGTTTGGGGTGAAGTTCAATTTGGAGAAGTTAGGATATGATATCAAGAACAACTTGCTTTTGTTTTAG 2607 0.4327 MSTAIDKRGPYTALDQYGVVHTFNTNPKTPLLFDYSNEDENNKYLKLMKDIILKGKSEVEPSVLDPRDEGTSDHWIQRNASLLRLTGKHPFNSEPPLQTLMHHGFITPAQLHYVRNHGPVPKAQWDDWTVEVTGLVKHPTQFTMDQLIHDFPSREFPVTLVCSGNRRKEHNMVKQTIGFNWGPSATSTSLWRGVPLRKVLKRCGIFNRNSGALFVCFEGAEELPGGGGSKYGTSIMSEVALDRTRDIILAYLQNGEVLAPDHGYPVRVIVPGFTAGRMVKWLKRIIVTTKESDSYYHYHDNRTLPSHVDAELANAEAWFYKPEYIIYELNINSLITTPCHGEILPVNSNTIQRPYILRGYAYSGGGRKVTRVEVTMDGGETWRVCRLEHTEKPNKYGKHWCWCFWSLEVEVLDLFGAKEIAVRAWDLALNTQPENLNWNLMGMMNNCWFRVKTNVYKPQKGEIGIMFEHPTQPGNQSGGWMVKQKEQPLPTPNNNIIVSSSHHTTTSKIYTMSEVKKHNNSESAWIVVNGHIYDCTTYLKDHPGGVDSILINAGTDCTEEFEAIHSDKAKKMLNDYLIGELLVTADINNNNSDVIKEVTKIHNNNMALINPREKIPCKLVSKKSISHNVRIFRFALPYEDQLLGLPTGKHLYVCATIDEKLCMRAFTPTSGVDEVGYFDLVVKIYFKGVHPKFPNGGLMSQHLDSLPIGSSLDFKGPLGHIEYIGKGNFMVSGKNKFAKRLVMLAGGTGITPIYQVVQAILKDEEDLTEMYVVYANKTEDDILLREDLDVWAKKYERFKVWYVVQESKREGWEYSVGFITESMLKKHVPEASVDTLALACGPPPMIQFGVKFNLEKLGYDIKNNLLLF 868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01562 868 PRINTS Cytochrome B5 reductase signature 643 654 - -
Car05g01562 868 PRINTS Cytochrome B5 reductase signature 664 671 - -
Car05g01562 868 PRINTS Cytochrome B5 reductase signature 709 723 - -
Car05g01562 868 PRINTS Cytochrome B5 reductase signature 742 761 - -
Car05g01562 868 PRINTS Cytochrome B5 reductase signature 780 791 - -
Car05g01562 868 PRINTS Cytochrome B5 reductase signature 836 844 - -
Car05g01562 868 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 507 582 IPR001199 -
Car05g01562 868 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 712 862 IPR039261 -
Car05g01562 868 Pfam Oxidoreductase molybdopterin binding domain 117 296 IPR000572 -
Car05g01562 868 Gene3D Translation factors 604 718 - -
Car05g01562 868 Pfam Oxidoreductase NAD-binding domain 743 848 IPR001433 GO:0016491
Car05g01562 868 PIRSF Nitr_rd_NADH 12 867 IPR012137 GO:0006809|GO:0042128|GO:0050464
Car05g01562 868 ProSitePatterns Eukaryotic molybdopterin oxidoreductases signature. 134 169 IPR022407 GO:0043546
Car05g01562 868 PANTHER NITRATE REDUCTASE 43 868 - -
Car05g01562 868 Pfam Mo-co oxidoreductase dimerisation domain 324 454 IPR005066 GO:0016491|GO:0030151
Car05g01562 868 Pfam Cytochrome b5-like Heme/Steroid binding domain 511 581 IPR001199 -
Car05g01562 868 PRINTS Cytochrome B5 signature 532 542 IPR001199 -
Car05g01562 868 PRINTS Cytochrome B5 signature 542 556 IPR001199 -
Car05g01562 868 PRINTS Cytochrome B5 signature 557 564 IPR001199 -
Car05g01562 868 PRINTS Cytochrome B5 signature 569 581 IPR001199 -
Car05g01562 868 CDD eukary_NR_Moco 68 453 - -
Car05g01562 868 Gene3D - 504 582 IPR036400 -
Car05g01562 868 Pfam Oxidoreductase FAD-binding domain 617 723 IPR008333 -
Car05g01562 868 Gene3D - 67 318 IPR036374 -
Car05g01562 868 Gene3D - 719 868 IPR039261 -
Car05g01562 868 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 612 724 IPR017927 GO:0016491
Car05g01562 868 SUPERFAMILY Riboflavin synthase domain-like 607 725 IPR017938 -
Car05g01562 868 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 541 551 IPR001709 GO:0016491
Car05g01562 868 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 742 761 IPR001709 GO:0016491
Car05g01562 868 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 768 777 IPR001709 GO:0016491
Car05g01562 868 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 780 791 IPR001709 GO:0016491
Car05g01562 868 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 812 828 IPR001709 GO:0016491
Car05g01562 868 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 836 844 IPR001709 GO:0016491
Car05g01562 868 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 538 545 IPR018506 GO:0020037
Car05g01562 868 SMART Cyt_b5_2 510 582 IPR001199 -
Car05g01562 868 SUPERFAMILY E set domains 328 455 IPR014756 -
Car05g01562 868 PANTHER NADH-CYTOCHROME B5 REDUCTASE 43 868 IPR001834 GO:0016491
Car05g01562 868 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 505 582 IPR036400 -
Car05g01562 868 PRINTS Eukaryotic molybdopterin domain signature 83 97 IPR008335 GO:0016491
Car05g01562 868 PRINTS Eukaryotic molybdopterin domain signature 105 121 IPR008335 GO:0016491
Car05g01562 868 PRINTS Eukaryotic molybdopterin domain signature 158 169 IPR008335 GO:0016491
Car05g01562 868 PRINTS Eukaryotic molybdopterin domain signature 169 181 IPR008335 GO:0016491
Car05g01562 868 PRINTS Eukaryotic molybdopterin domain signature 184 199 IPR008335 GO:0016491
Car05g01562 868 PRINTS Eukaryotic molybdopterin domain signature 242 258 IPR008335 GO:0016491
Car05g01562 868 PRINTS Eukaryotic molybdopterin domain signature 259 272 IPR008335 GO:0016491
Car05g01562 868 PRINTS Eukaryotic molybdopterin domain signature 275 288 IPR008335 GO:0016491
Car05g01562 868 PRINTS Eukaryotic molybdopterin domain signature 326 338 IPR008335 GO:0016491
Car05g01562 868 PRINTS Eukaryotic molybdopterin domain signature 357 371 IPR008335 GO:0016491
Car05g01562 868 PRINTS Eukaryotic molybdopterin domain signature 371 383 IPR008335 GO:0016491
Car05g01562 868 PRINTS Eukaryotic molybdopterin domain signature 398 408 IPR008335 GO:0016491
Car05g01562 868 PRINTS Eukaryotic molybdopterin domain signature 423 435 IPR008335 GO:0016491
Car05g01562 868 PRINTS Eukaryotic molybdopterin domain signature 436 449 IPR008335 GO:0016491
Car05g01562 868 CDD cyt_b5_reduct_like 617 868 - -
Car05g01562 868 Gene3D - 328 503 - -
Car05g01562 868 SUPERFAMILY Oxidoreductase molybdopterin-binding domain 66 326 IPR036374 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01562 Car-Chr5 60160877 60166003 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01562 618 859 NADPH P450 reductases AT5G17770 40.408 3.10e-46 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01562 K10534 - gmx:732634 1340.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01562 05 60160877 60166003 Car05g01562 05 60160877 60166003 ECH