Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01555 ATGGATGGGAAGTCTAACCTTCCGATCAAGCCAGATCCTTCTTCCCCGGACTTCCTCCGCCACGTTCAAGCCGCCTTGAAACGTCACCGCCCTCTCGGTTCAACGCAATCCAATAGCTTCAGGCCAAGGCGCACGCTGGTTCATCAACCACACGATTCACCTGAAACCAGCACCGTTGATACTCCTTCTCAAGATCCAAATGCTCAAAACAAAGTTCAATTTTCCAATACTGTTCCACAAGGGGCCAATGATGTAAAGGCCATTGATTTGGAGAGTTTGTCTTCTCATATGAGTTCACTTGGATTCACAGAAATGGAGTGGGTTGAAGGTAACCAACCTGAAGCTTTGATTGGATTCAACGATGATTCGAAGCAACCTAAAGTTCTGCAGACTGAGCCTGATTTTAGTTTGAGATCCGATGGAGGAATAAGTTGCTCCATGTTACCGAGGAGGAATACGGTTACGCGGGATAATTTGCAGCAGTTCAGAAACTTTCTAAGCCAGCCGGCGACACAGTCTTCGGTAGTGGGACCTTCGTGTGCCACAACTACTTCAGTCAATTCAACTTCAGCTCCTATGATGAATTCAACAACCCATTTGCATATAGAAAGTGGCACACGTGTGGCTGCTGGTCCGTTTGGAGAGATTCGTGTTAAACCTATAACTGAAAGTGTTATGGAATCAGCAAATATAGATACTTCAGTGAAAAAAGGGAATATAATATCAGTTGATAAGGATGCAGCTCCAGGGCAAGCTTCTGATTCTTGTGTCGATGCCGAGTTGGCATTTAAAGAGAGTGAACAATCTAAGGAGCAGCAAGCATCCATGTTAAAAGAAACCAGTAATTCAAAATATGTTTCTTGGGATGGCGACAAGTTGACCGAACGGAAAGAGGTTGCAGATGTTTCAAACATACAGCCTCAGGCTTCGGTGTCCAAAGCACCTTCTGTGAATGTGAAGTTTGAATCTTCTAATATAGAAAAGCGAGAGAAGGCTGTGAGTAGTAGAAGTTCGTCGGTCAATAAGAAAAGGTCCTATGACCCCGATTTGTTTTTTAAGGTTAATGGAAAACTTTATCAACGTCTTGGCAAGATAGGTAGTGGTGGAAGCAGTGAGGTGCACAAGGTGATTTCATCAGACTGTAAGATATATGCACTTAAGAAGATCAAACTCAAGGGTCGTGATTATGCTACTGCATATGGGTTTTGTCAAGAGATTGAGTATCTTAATAGGCTGAAAGGAAAGGATAATATCATACAGCTTATAGATTATGAGGTAACTGACAAGGCTTTGCTCGAAGAAGTTATGAAAGGCACTCTCAGTATTAAGGATGGCCGAGTCAAGGATGACGGATATATATTCATGGTACTTGAATACGGGGAAATTGATTTAGCTCACATGTTGTCCCAGAAGTGGAAGGAACTTGATGGACCCAACCAGACCATAGATGAGAACTGGCTTCGATTTTATTGGCAGCAAATTCTTCAAGCTGTCAACACAATTCATGAGGAACGTATTGTCCATTCTGACTTGAAGCCTGCTAACTTCCTCCTTGTCAAAGGTTCCCTAAAACTGATTGATTTTGGTATCGCCAAAGCAATAATGAGTGATACAACTAATATTCAACGGGATTCGCAGGTGGGTACTTTGAGTTACATGTCTCCAGAAGCATTTATGTGTAATGAGACAGATGCAAACGGAAACATCATTAAGTGTGGTCGGCCATCAGATATATGGTCTTTGGGCTGCATCCTTTATCAAATGGTATATGGAAGAACCCCTTTTTCAGAATACAAGACATTTTGGGCCAAATTTAAAGTTATAACAGATCCAAGTCATGAAATTACGTACGAACCACTTTCAAATCCATGGCTAGTAGATCTAATGAAGAGGTGCCTAGCATGGGATCGGAATCAAAGGTGGAGAATTCCTCAGTTACTCCAACATCCTTTTCTTGCACCTCACGTACCACCTCATCCATCTTTGTCCCAAGACCATAGCTGTAAATTTATACAACTCATTGCTGAAACTTGTACATATGACTCTGAAGCATCGCAACTGTGTCATCAGCTCCAACGTCTACTTGTTGATCCACTCGAGTTAACAACTCACTCACTAAATTCACAAGATCAACAAAGATCACTGTTATCCCAAATGTCTGAACTCTGTATACAGCTGCGGGAACGTTTGGTAGATACTGATATCAAGTAA 2211 0.4215 MDGKSNLPIKPDPSSPDFLRHVQAALKRHRPLGSTQSNSFRPRRTLVHQPHDSPETSTVDTPSQDPNAQNKVQFSNTVPQGANDVKAIDLESLSSHMSSLGFTEMEWVEGNQPEALIGFNDDSKQPKVLQTEPDFSLRSDGGISCSMLPRRNTVTRDNLQQFRNFLSQPATQSSVVGPSCATTTSVNSTSAPMMNSTTHLHIESGTRVAAGPFGEIRVKPITESVMESANIDTSVKKGNIISVDKDAAPGQASDSCVDAELAFKESEQSKEQQASMLKETSNSKYVSWDGDKLTERKEVADVSNIQPQASVSKAPSVNVKFESSNIEKREKAVSSRSSSVNKKRSYDPDLFFKVNGKLYQRLGKIGSGGSSEVHKVISSDCKIYALKKIKLKGRDYATAYGFCQEIEYLNRLKGKDNIIQLIDYEVTDKALLEEVMKGTLSIKDGRVKDDGYIFMVLEYGEIDLAHMLSQKWKELDGPNQTIDENWLRFYWQQILQAVNTIHEERIVHSDLKPANFLLVKGSLKLIDFGIAKAIMSDTTNIQRDSQVGTLSYMSPEAFMCNETDANGNIIKCGRPSDIWSLGCILYQMVYGRTPFSEYKTFWAKFKVITDPSHEITYEPLSNPWLVDLMKRCLAWDRNQRWRIPQLLQHPFLAPHVPPHPSLSQDHSCKFIQLIAETCTYDSEASQLCHQLQRLLVDPLELTTHSLNSQDQQRSLLSQMSELCIQLRERLVDTDIK 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01555 736 SMART serkin_6 359 652 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g01555 736 Gene3D Transferase(Phosphotransferase) domain 1 474 657 - -
Car05g01555 736 PANTHER DUAL SPECIFICITY PROTEIN KINASE TTK 14 706 IPR027084 GO:0004712|GO:0007093|GO:0051304
Car05g01555 736 SUPERFAMILY Protein kinase-like (PK-like) 353 662 IPR011009 -
Car05g01555 736 Pfam Protein kinase domain 359 652 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g01555 736 MobiDBLite consensus disorder prediction 30 44 - -
Car05g01555 736 CDD PKc_Mps1 357 652 - -
Car05g01555 736 PANTHER MIXED LINEAGE PROTEIN KINASE 14 706 - -
Car05g01555 736 ProSitePatterns Protein kinases ATP-binding region signature. 365 387 IPR017441 GO:0005524
Car05g01555 736 MobiDBLite consensus disorder prediction 51 79 - -
Car05g01555 736 ProSitePatterns Serine/Threonine protein kinases active-site signature. 506 518 IPR008271 GO:0004672|GO:0006468
Car05g01555 736 MobiDBLite consensus disorder prediction 1 79 - -
Car05g01555 736 ProSiteProfiles Protein kinase domain profile. 359 652 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g01555 736 Gene3D Phosphorylase Kinase; domain 1 352 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01555 Car-Chr5 60072221 60076379 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01555 365 652 MAP Kinase Kinase Kinase AT4G08470 27.645 8.03e-23 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TTK Car05g01555 Pkinase 2.1e-55 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01555 K08866 - gmx:100780144 997.653
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01555 05 60072221 60076379 Car05g01555 05 60072221 60076379 ECH