Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01554 ATGAGcaaatccaaaactcaaagaaaacctaccattaccaaacacataagccaaaaagaaaaccaaaagccaCATAAAACAGAGAAACAACCCTCTTGGGCAGTTGTAAGAGGCTTTTTAGCTTGTAAGAATGTTGAAATCCAAAAACAACAGCTACAACTGAAGGAAACAAAACAACCACAACCACAACCACAACCTATAACAGAAACAAAGGAACATAGGAAGCTGAAAGAGGAAGAAAGAGTTCCAGAAGAAAACAACAAGAAATGCAAGAAGATGAAATGTTCAGGTTCTCTCTGCAACAACAGTACTGGTGTCATGGCGAAACCCGAAACAACAACTTTGGAAATTCATAAGAAAAAGGCTTCATTTGGTGGATACAAAAACAATGAAGCTTCTAGTTCTAGTAGATCCATGAAAGCTCCTCTGAATGAAATCAACGGAACTGTATCAGCCTCTTCTTCTTCGCTTTCTGCAGCATCTTCTAACTCATCTGTAGCTGACTCTTCTTTAAGAAGTTCCATTTCTTCTTGTCCTGATTGTGGTGAGATCATGAAAGCTGAAAGCCTTGAACATCATCAAGCTGTCAAACATGCAGTTTCTGAGCTGGGTCCAGAAGACACAAGCAAGAACATAGTCGAAATCATATTCCATTCAAGCTGGCTAAAGAAGCAATCACCAGTATGCAAAATCGACCGAATCCTTAAAGTCCACAACACTCAAAAAACCATAACAAAATTCGAAGAGTACAGAGACTCAATCAAAGCCAAAGCCACAAACCTCTCGAAAAAACACCCAAGATGCATAGCGGACGGCAACGAGTTACTAAGGTTTCACTGCACCACATTCATGTGTTCATTAGGCCTAAACGGATCATCAAATCTCTGCAACTCAACACCGCAATGTAATGTGTGCAGCATTATAAAACACGGGTTCAAGATGAACGGTGGAGATGGGATATTAACGACCGCGACGAGTGGGAAAGCACATGACAAAGCAACAAGTGTTTTGGTTTGTGGAGGTTGTGATAATAATAATAATGAGAGTGGTGATGAGAAGAGGGCAATGTTGGTTTGTAGGGTAATAGCTGGGAGAGTGAAGAAGAATAACATGGAAGGTGGTGGAGGTATGGAAGAGTGTGATTCTGTTGCTGGTGATGTTGTTGGTGCTTATTCTAATTTGGATGAGTTGTATGTGTACAATCCTCGAGCTATTTTGCCTTGCTTCGTTGTAATCTACAGAGGATTTTGA 1251 0.3853 MSKSKTQRKPTITKHISQKENQKPHKTEKQPSWAVVRGFLACKNVEIQKQQLQLKETKQPQPQPQPITETKEHRKLKEEERVPEENNKKCKKMKCSGSLCNNSTGVMAKPETTTLEIHKKKASFGGYKNNEASSSSRSMKAPLNEINGTVSASSSSLSAASSNSSVADSSLRSSISSCPDCGEIMKAESLEHHQAVKHAVSELGPEDTSKNIVEIIFHSSWLKKQSPVCKIDRILKVHNTQKTITKFEEYRDSIKAKATNLSKKHPRCIADGNELLRFHCTTFMCSLGLNGSSNLCNSTPQCNVCSIIKHGFKMNGGDGILTTATSGKAHDKATSVLVCGGCDNNNNESGDEKRAMLVCRVIAGRVKKNNMEGGGGMEECDSVAGDVVGAYSNLDELYVYNPRAILPCFVVIYRGF 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01554 416 SUPERFAMILY ADP-ribosylation 200 415 - -
Car05g01554 416 Gene3D - 200 414 - -
Car05g01554 416 MobiDBLite consensus disorder prediction 68 85 - -
Car05g01554 416 MobiDBLite consensus disorder prediction 13 27 - -
Car05g01554 416 MobiDBLite consensus disorder prediction 53 67 - -
Car05g01554 416 MobiDBLite consensus disorder prediction 1 32 - -
Car05g01554 416 MobiDBLite consensus disorder prediction 53 85 - -
Car05g01554 416 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 32 414 - -
Car05g01554 416 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 32 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01554 Car-Chr5 60058266 60060796 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01554 175 414 C2H2 Transcription Factor Family AT1G75710 52.593 9.52e-87 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01554 - - gmx:100817333 537.724
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01554 05 60058266 60060796 Car05g01554 05 60058266 60060796 ECH