Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01545 ATGGAAATGGACATGGATACAATCCATGACCTCGACTTCTCCGGACACAGCACCCTCACCAATACCCCTACTTCCGACGAAGACTACGGTTGTAACTGGAACCACTGGTCTCCTATCGTCAACTGGGACACCTTCACGGGTACCCAGGACGACTTTCACCATCTCATGGATTCCATCATAGACGACAGAACCACCGTCGTCGAACAGCTCAGCCcctccaccaccaccgccactacaacaacaacaacaacaaccacggaggaggaggaagatgaagaagaggaAACAGAAATAAAAACAGAAAAAACAGCAGCACAAGCAGCGGGAGATGATTTAAAAGGGCTAAGGCTAGTCCACCTATTGATGGCTGGCGCGGAAGCTTTAACCGGCTCGACCAAAAGCCGCGACTTGGCTCGAGTGATATTGGTTCGGCTCAAGGAGTTGGTGTCCCAACAAGCCCACGGCTCCAACATGGAGAGACTCGCCGCTTATTTCACAGAAGCGCTTCAAGGGTTACTAGAAGGCGCTGGGGGTGCGCACAATAACAACCACCATCACCCCCAAGGTGGACCCCACGACAACCAAAACGACACACTCGCTGCTTTCCAACTACTTCAAGACATGTCTCCTTACGTCAAATTCGGCCACTTCACCGCCAATCAGGCCATCCTCGAGGCCGTGGCCCACGAACGACGAGTCCACGTCATCGACTACGATATCATGGAAGGGGTCCAATGGGCCTCATTAATCCAGGCCCTAGCTTCCAACAAAAACGGCCCACATCTCCGAATCACCGCATTATCAAGAACCGGAACAGGACGCCGATCAATCGCCACCGTTCAAGAAACCGGCCGTCGATTAACCTCCTTCGCCGCTTCCCTTGGCCAACCGTTTTCATTTCACCACTGTAGACTAGACTCCGATGAAACGTTTCGTCCTTCTTCACTGAAGTTAGTTAGAGGAGAGGCTTTGGTTTTTAATTGCATGCTTAATTTGCCTCACCTTAGTTACCGTGCACCCGATTCGGTTGCTTCGTTTTTGAATGGAGCAAAAGCGTTGAAACCGAGGCTTGTGACGTTGGTGGAGGAAGAAGTTGGATCGGTTGTTGGAGGATTCGTGGAACGGTTCATGGACTCGCTTCATCATTACTCTGCGGTGTTTGATTCGTTGGAGGCTGGGTTTCCAATGCAGAATCGGGCCAGGGCTTTAGTGGAGCGAGTGTTTTTTGGGCCTCGGATTGCGGGCTCATTGGCCCGGATATATCGAACGGGTGGAGAGGAGGAGAGAAGGTCGTGGGGGGAATGGTTAGGTGCGGCAGGGTTTAGGGGAGTTCCCGTAAGCTTTGCGAATCATTGCCAAGCGAAGCTGTTGTTGGGTCTATTCAATGACGGGTATAGGGTGGAAGAGGTGGGTGTAGGTAGTAATAAGTTGGTGTTGGATTGGAAATCAAGGCGTTTGCTATCTGCCTCCGTTTGGACTTGTTCTTCGGAATCAGATTTATAG 1503 0.4897 MEMDMDTIHDLDFSGHSTLTNTPTSDEDYGCNWNHWSPIVNWDTFTGTQDDFHHLMDSIIDDRTTVVEQLSPSTTTATTTTTTTTTEEEEDEEEETEIKTEKTAAQAAGDDLKGLRLVHLLMAGAEALTGSTKSRDLARVILVRLKELVSQQAHGSNMERLAAYFTEALQGLLEGAGGAHNNNHHHPQGGPHDNQNDTLAAFQLLQDMSPYVKFGHFTANQAILEAVAHERRVHVIDYDIMEGVQWASLIQALASNKNGPHLRITALSRTGTGRRSIATVQETGRRLTSFAASLGQPFSFHHCRLDSDETFRPSSLKLVRGEALVFNCMLNLPHLSYRAPDSVASFLNGAKALKPRLVTLVEEEVGSVVGGFVERFMDSLHHYSAVFDSLEAGFPMQNRARALVERVFFGPRIAGSLARIYRTGGEEERRSWGEWLGAAGFRGVPVSFANHCQAKLLLGLFNDGYRVEEVGVGSNKLVLDWKSRRLLSASVWTCSSESDL 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01545 500 MobiDBLite consensus disorder prediction 68 84 - -
Car05g01545 500 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 3 493 IPR005202 -
Car05g01545 500 MobiDBLite consensus disorder prediction 68 99 - -
Car05g01545 500 ProSiteProfiles GRAS family profile. 108 493 IPR005202 -
Car05g01545 500 Pfam GRAS domain family 117 493 IPR005202 -
Car05g01545 500 MobiDBLite consensus disorder prediction 176 195 - -
Car05g01545 500 PANTHER SCARECROW-LIKE PROTEIN 26 3 493 IPR030028 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01545 Car-Chr5 59959725 59961496 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01545 72 496 GRAS Transcription Factor Family AT3G54220 36.977 3.29e-56 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Car05g01545 GRAS 1.7e-102 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01545 - - gmx:100782300 700.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01545 05 59959725 59961496 Car05g01545 05 59959725 59961496 ECH