Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01537 ATGGACAAAATAGGTGCTTCAAATTTTGGCAATAAAATGAGTAAGGCAAGGCCTTATGTGTTAACGGTGGCACTCCAATTCGGATTTGCAGGAGCATACATATTTTCTATGGCCAGTTTTAAACTCGGAATGAATCGTTTTGTGTTCATTGTTTATCGTAATATTATTGCTGCAATTGCCCTCGCTCCTTTTGCATTCATTTTTGAAAGGAAAACTAGGCCAAAGATGACAATATCAGTCTTTTTGCAGATAATGGCACTCGCATTTTTGGAGCCAGTGATTGACCAAGGGTTTACTTTCTTGGGTATGCAATATACATCTGCTTCATTTGCATCTGCTTTGATGAATGCTGTGCCTTCTGTTACCTTTGTCTTAGCCGTAATTTTCAGGTTAGAGCGTGTAAACATTAAGGAGATTAGAAGCATAGCGAAAGTGATTGGAACGTTGGTAACATTTGGAGGAGCATTGATGATGATACTTTACAAAGGCCCACAAATAAGCCTTTTTTATTCTCCAAACACGGCCCATCATCATGCTGGAACTCACGATACGCAAAGTCTCAAACATTGGGTCTCAGGAACACTCTTTNNNNNNNNNNGCTTGGTCATCTTTCTTCATTTTACAGGCAATTATTATTTCAAATATATTTGCTTGTTCAATTTTTATATGATTTTTTATGTTATTAAAATTGATAAAAAGTTACATCAATTTAATATGTTACTGCAGTCGATAACATTGAAAAAGTATCCGGCAGAAATGTCACTGTCCTCTTTAATATGCTTAGTTGGTGCTATGCAAACCAGCGTGGTGGCGGTGGTGGCGGAGCGTCACTCCGGTGCTGGTGTTTGGGCCCTTGGTTGGGACTTTAGACTATATGGTCCTCTCTACACGGGAATAATTACCTCAGGAATAACGTATTATGTGCAAGGGTTGGTAATGCAAAGCAGAGGCCCAGTATTTTTCACAGCTTTTAATCCTCTTTGTATGATCATTACTTGTGCTTTGGGCTCTTTCCTTTTCGCAGACCAACTCCACTTGGGCAGTATCATTGGAGCCATCATTATTGCAATAGGTCTTTATTGTGTGGTGTGGGGTAAAGCCAAAGACAATTCAAACACTACGCCAGTATCACCTACAACAATGAAGCAAATAGAGACACAACACCTTCCAATTACTGCATCTGGTCATGTCTAA 1194 0.3911 MDKIGASNFGNKMSKARPYVLTVALQFGFAGAYIFSMASFKLGMNRFVFIVYRNIIAAIALAPFAFIFERKTRPKMTISVFLQIMALAFLEPVIDQGFTFLGMQYTSASFASALMNAVPSVTFVLAVIFRLERVNIKEIRSIAKVIGTLVTFGGALMMILYKGPQISLFYSPNTAHHHAGTHDTQSLKHWVSGTLFXXXXLVIFLHFTGNYYFKYICLFNFYMIFYVIKIDKKLHQFNMLLQSITLKKYPAEMSLSSLICLVGAMQTSVVAVVAERHSGAGVWALGWDFRLYGPLYTGIITSGITYYVQGLVMQSRGPVFFTAFNPLCMIITCALGSFLFADQLHLGSIIGAIIIAIGLYCVVWGKAKDNSNTTPVSPTTMKQIETQHLPITASGHV 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01537 397 Pfam EamA-like transporter family 20 159 IPR000620 GO:0016020|GO:0016021
Car05g01537 397 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 162 - -
Car05g01537 397 PANTHER WAT1-RELATED PROTEIN 239 388 IPR030184 GO:0016021|GO:0022857
Car05g01537 397 PANTHER WAT1-RELATED PROTEIN 239 388 - -
Car05g01537 397 PANTHER WAT1-RELATED PROTEIN 12 203 IPR030184 GO:0016021|GO:0022857
Car05g01537 397 PANTHER WAT1-RELATED PROTEIN 12 203 - -
Car05g01537 397 SUPERFAMILY Multidrug resistance efflux transporter EmrE 285 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01537 Car-Chr5 59833008 59836215 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01537 10 392 Nodulin-like Gene Family AT4G08300 44.416 2.92e-115 339
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01537 - - gmx:100775669 522.316
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01537 05 59833008 59836215 Car05g01537 05 59833008 59836215 ECH