Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01536 ATGGGTGCGTGGTTAAGAAATGCAAAACCATATCTACTATTGTTAGCTGTACAATTTGGGTCTGCTGTCATGTTCATTTTCGCCATGGATGCTATCAACAAAGGCATGAGTCATTACGTCTTCATTGTCTACCGTAATGCCATTGCTGCTGTAACATTAGCTCCCTTTGCATTTTTTCTAGAAAGGAAAGTCAGACCCAAGATGACTCCCCGTGTATTTTCAGAGATTATGGCACTGGCTTTCTTTGAAATAATACTTGATCAATGCTTTGCCCTGTTGGGGATGAAATTAACGTCCGCATCCTTCTTGTCTGCTGTGATGAACTCCGCCCCCTCCATTACTTTTGTGTTGGCAGTCATTCTAAAACTTGAGCACATGAAGATTAAGGAGGTAGCATGTCAAGCGAAACTGATCGGCACAGCAATAACATTCGGAGGAACATTGCTAATGGCTCTGTATAAAGGTCCTGTAGTTAGTGTTGTGAGGTCATCCATTAATCATGCTACCCAGCCTCAGAATGTGGACGACCCTACCGGTAACCGCTGGATCATAGGGACATGTTTCCTCCTCATTGGTTGCGCTGGCTTCTCTTCATTTTACATATTGCAGGCCATAACGTTGAGAAAGTACCCAGCAGAAATGTCCTTAGCAACCTGGGTTTGTTTTATAGGCGCACTTCAAAGCTTTGTGGTAGCGTTTTTCGCGGAGCGCCATCACTCTCATGCTTGGTCTCTAGGTTGGGATACACGACTCTTTGCCCCAGCTTATGCGGGGATAGTTACATCAGGAGTCCAATATTACATACAAGGCAAGGTCATAAAAACAATGGGTCCAGTTATTGTAACTGCTTTTAATCCCCTGCGTATGATCATTGTCACGGCCTTGGCGTGCATCATTCTCTCTGAGCAACTCTTTCTTGGAAGTATTATTGGAGCAATAGTGGTGGTTTCTGGGCTTTATCTAGTTGTGTGGGGAAAATCTAAAGAATACAAAGCTCGCAATGAGATGCCACCGTCACCTACAAAGGAGAACTCATTGCAACACCAACAGCAGCTACCCGTCACTGCTCCTAGAAATGAAATTAGCGATAACAAAACTCAATTGGTTTTTCACGCTGAAGAACAATGCTACAATTGTGGGCCAAATTAA 1149 0.4378 MGAWLRNAKPYLLLLAVQFGSAVMFIFAMDAINKGMSHYVFIVYRNAIAAVTLAPFAFFLERKVRPKMTPRVFSEIMALAFFEIILDQCFALLGMKLTSASFLSAVMNSAPSITFVLAVILKLEHMKIKEVACQAKLIGTAITFGGTLLMALYKGPVVSVVRSSINHATQPQNVDDPTGNRWIIGTCFLLIGCAGFSSFYILQAITLRKYPAEMSLATWVCFIGALQSFVVAFFAERHHSHAWSLGWDTRLFAPAYAGIVTSGVQYYIQGKVIKTMGPVIVTAFNPLRMIIVTALACIILSEQLFLGSIIGAIVVVSGLYLVVWGKSKEYKARNEMPPSPTKENSLQHQQQLPVTAPRNEISDNKTQLVFHAEEQCYNCGPN 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01536 382 PANTHER WAT1-RELATED PROTEIN 7 356 IPR030184 GO:0016021|GO:0022857
Car05g01536 382 Pfam EamA-like transporter family 184 323 IPR000620 GO:0016020|GO:0016021
Car05g01536 382 Pfam EamA-like transporter family 9 150 IPR000620 GO:0016020|GO:0016021
Car05g01536 382 MobiDBLite consensus disorder prediction 333 353 - -
Car05g01536 382 PANTHER WAT1-RELATED PROTEIN 7 356 - -
Car05g01536 382 SUPERFAMILY Multidrug resistance efflux transporter EmrE 44 154 - -
Car05g01536 382 SUPERFAMILY Multidrug resistance efflux transporter EmrE 219 328 - -
Car05g01536 382 MobiDBLite consensus disorder prediction 338 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01536 Car-Chr5 59819462 59821525 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01536 5 371 Nodulin-like Gene Family AT2G37460 42.276 3.80e-104 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01536 - - gmx:102665912 606.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01536 05 59819462 59821525 Car05g01536 05 59819462 59821525 ECH