Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01532 ATGGCCGGTCCCGTCACGGAGCTCAGTCCCTCCGGCAATGCTGCCATACCGCCAGGCCGTAGTGTCCGCCGGAGATTGGTCCAATCGACTCTCTTCCCTCACAAGCCACCAGAACCCCGCAACAAACCGGAGGAAAACACCGACAGTGGTGACGAACAAGACGAGGATTACTGCGACACGAAGAATCGCAGGAAGAGAAAATCCAAAGCTAAAGTTACTCCCGTAGCAAAAGGTTCTAAGAGTGCCACACCGAAGAAAAATGCATCTGCTAATGGAATTATGGCGTCAACTTCACGGAATGTTTTGGCTGATTTCGATAAGGTTGTTATATCCGTGCCTGATTTGCGGTTAGAGGCAAAATTGTCAGCTGAGGAAAATTCCAGGATGTTTGCTGGAAGGCAAGTACATCCATTTTTTTCATCATTGAAAGCAGGGAAGAAAGTTCAGGAGCTGTCTGAATCAGGAAGTAATTTCTTCAAAGCTAAGAATGAGGATGAAAGGATTACCTGTGGTCCTATTCATGTATTTGAAAATATCAAGGACGACACCTCATCCCTTGACTGGAGAAACTGGACATTTTTGGAAAATACCACCTATGTGAGTTGCGGTTTAGAAAGTTCAAATTCATCTGTTTTGGAGGGTTCTGTCGGATGCTTAAATTTTGATAAGATTCGTGGTACTTTGGATCCACTGGGGGATTCAAGTTTTCAGAATGCCTCAACTTCTTTGGATAGATATTCTATATGTCCAGAAAATCTGTCAGAAACATCACGGACAAATTCAACTCCAGAGGAGCAAATAATAAGTGCTCAGATGCCAAAAGATGCCAAAATGGACTCGGAGGCGGATGAATTTGTTACCTTTTCTGTACAAGCTGGCTATTTTCGAAAGTCACATTCAGAGCCGCTGAATAGATTTCTTCAAGAAAGTATGAGGCCATACTACGTTGGTTGTGAAGATAAGGCAGAAAGCAGCTTATGGACGTACAAATACAAGCCAACTAAGGCTGTCGAGGTATGTGGTAACGACGAAGCTGTGAATTTCTTGAGTGACTGGCTACATCAGTGGCATGAAAGACGTTACAAACCCAGGAAGGAAACATCTAATAGAAATACAAGGGTCATGTCAAATGATGATGATGATTTTATCTGTTATGACAGTGACAATGATTCAGAAGATATGAATGAAGAGGATTCCCTGCAGAATGTTCTTTTAATTACAGGGCCAATAGGGAGTGGCAAGTCTGCAGCCGTCTATGCTTGTGCCAAAGAGCAAGGGTTTGATATATTAGAGCTCAATGCATCGGATTGTAGAAACGGAACTGTTGTCAAGCAGTATTTTGGAGACACTCTTAGTTCACATGGGTTCAAAAGGTCATCAGACCACACTGTGAGCTCACAGAAGATAACTACAAAGTTGCCCCCAGCTCTTGCTTTGGTTAATGGTAAAGCTGCTGATGAGGTGAATGATGGAGTAGTTGAACTGATAACGGTATCTGATGATGAAGCTCATAGCCCTGGTGGAACATCACAAAAGTTACTTGGCAAGAATAATGTTGTTGCATGTGATAAAGTCCAAACTTTAATCCTGGTTGAGGATGTGGACATCCTTTTTCCTGAAGACCGTGGATGTATTGCTGCCATACAACAGATTGCAGAGACAGCAAGGGGGCCAATTATATTGACCAGCAATAGTGATGATCCTGGCCTGCCAGATAATTTTGATAAGCTTCATGTTTCATTCTTATTGCCATCGCCAAAGGAGTTGCTTTGCCATTTGTACTCTGTTTGTCTCACTGAAGGAGCTGACATCCATCCTCTTTTACTGGAAAAGTTTATGCAGTCCTGTGATGGAGATATCCGAAAAACCATTATGCATCTTCAGTTCTGGTTGCAAAGTAAAATATTTAGAAAAGCAGATGGAAAAGCACAAACAAGCTATGGCTCACTTCCATTTGATCTTGAGGTTGGTCATCAGATACTACCAAAGATAATGCCGTGGGGTTTCCCCTCAGAGATATCTGAACTAATTGAGAATGAATTTGTCAAATCCGTAAATGTAATGGAAGAGAATTCCAGTTTGCAAGAGTTAGTTGAGGAAAAGCCTCTTCACATAAACAAAAGGCAAAATGATTTAGATGAGCAGTGTATGGAAACTGATTATATAAAAGCCAAGAAGGTGGAGATGATTAAGAGAAATGGGTCAATAACAGATTACTGTGAGCTTGAAATTCAATACAGAGCCATTTCTGAGTTTTCAAATTCTTCTGGATTGCCTGTAGCATCCTACCTGCAAAATGGTCGAAGGAAACTTGTAGTAATGTCCTCTGATTCTGAGGATGAGGATTCAAATATTCGACAGCCTCTAGACACAGATGATGAAGCTAACAAGAGACATTCCTTCAAAGAAAATAATGAATGTACCTCTGAGTTTCAGTTGAATGATAACTGTCCCAGCACATCTGTTCGTAAACTGGTTTGTTCTGAATTGGAGGATTCAGATGAGGAGCATGTTAAATATTCAGAAACAGCTGATGTTACATGCATAAATGAGACATCTAAATCATTAGATATATCTTGTGTACCAGAATCAACATTTGTTCCTGAGACTACAATAGAAGATGGAACAGAGACAATGTCTGGAGCGGTGTCTTCTTGCCATGCTCTAGAAGTTTCTATAAATAATGAGTTGAAACCATTCACTTCAAGTGTTCGCAGGCGTTTAGCAAAACTGTCACAAAATTCAGATATGTTGATGGATACTGAAATGCCAGATTATTCCCCAAAAGAGGCTTTGCAAGATTTTATAGATCAAAATATGGAAACTACAACTATCAAAGTGATGGATGAGTGCAGTCGCGTAGATTTCAAGCTAAAGTCAACATTTGTTGAGTCAAGTCCATCCATGGAGACAGATTTGGTACAGAATTTGTGGAAAAAACTTCGTCAAATGGATTTAAGACAGCATGCTATCTCAGAACAGCTAGGTACTTCTCAAGTTGTTAAACTTGCTAGTGGGATGAGCAATCTAATTTCAGAAGCTGATTTGTTTCACAATTACCAACATAAATGTGATATTTTGGGGCCCCAAATGTTCGCGTCTAATGAAGCTACATCTAATTGGTATAATGAGGAAACAATGATGTCGACCGTTGCTGTGCATGGATTTTGTTTTTATGCTAAACATATAGCCGATGTTGGATCAAAGTTGGGTTGTGCGAACAGGATTGATTTAACTTCTGAGATGTTGGCTTCCACAACTAACACTATGGCATTGGGGAAATTATCCAGACAGGGTCTCAGCAAAAGCACAGTTATTTATACTGGGAAGGAATTAGAGTTGAACAGCCCAATAAATAATATGAAGAAGAGTGAAAATAAAGCATCTGTGTTCGAGGTTGTCCAATCCATTGTTCCTGCGAGAATATCCTTGGCACTGAAAGGTGATATCTTCAATGAATATCTATCTTCATTGCGCCAAATTTCAAGGTCAGAAGCAGTCCGTGTTTCGCAAGGTGTTGAAAAGAAGAGAAGAGGAAGGTCGCGGGGTTCTCAACATTATTTGAGCAGATGTACAATGTTATCTCCTGAAGATATAACGTTGGTCAGTGACGGTGATTTGTACAGAAAAATCTCTTCAGAATATACAACTAACTTGGAAAGTAAACTATTATAG 3675 0.4041 MAGPVTELSPSGNAAIPPGRSVRRRLVQSTLFPHKPPEPRNKPEENTDSGDEQDEDYCDTKNRRKRKSKAKVTPVAKGSKSATPKKNASANGIMASTSRNVLADFDKVVISVPDLRLEAKLSAEENSRMFAGRQVHPFFSSLKAGKKVQELSESGSNFFKAKNEDERITCGPIHVFENIKDDTSSLDWRNWTFLENTTYVSCGLESSNSSVLEGSVGCLNFDKIRGTLDPLGDSSFQNASTSLDRYSICPENLSETSRTNSTPEEQIISAQMPKDAKMDSEADEFVTFSVQAGYFRKSHSEPLNRFLQESMRPYYVGCEDKAESSLWTYKYKPTKAVEVCGNDEAVNFLSDWLHQWHERRYKPRKETSNRNTRVMSNDDDDFICYDSDNDSEDMNEEDSLQNVLLITGPIGSGKSAAVYACAKEQGFDILELNASDCRNGTVVKQYFGDTLSSHGFKRSSDHTVSSQKITTKLPPALALVNGKAADEVNDGVVELITVSDDEAHSPGGTSQKLLGKNNVVACDKVQTLILVEDVDILFPEDRGCIAAIQQIAETARGPIILTSNSDDPGLPDNFDKLHVSFLLPSPKELLCHLYSVCLTEGADIHPLLLEKFMQSCDGDIRKTIMHLQFWLQSKIFRKADGKAQTSYGSLPFDLEVGHQILPKIMPWGFPSEISELIENEFVKSVNVMEENSSLQELVEEKPLHINKRQNDLDEQCMETDYIKAKKVEMIKRNGSITDYCELEIQYRAISEFSNSSGLPVASYLQNGRRKLVVMSSDSEDEDSNIRQPLDTDDEANKRHSFKENNECTSEFQLNDNCPSTSVRKLVCSELEDSDEEHVKYSETADVTCINETSKSLDISCVPESTFVPETTIEDGTETMSGAVSSCHALEVSINNELKPFTSSVRRRLAKLSQNSDMLMDTEMPDYSPKEALQDFIDQNMETTTIKVMDECSRVDFKLKSTFVESSPSMETDLVQNLWKKLRQMDLRQHAISEQLGTSQVVKLASGMSNLISEADLFHNYQHKCDILGPQMFASNEATSNWYNEETMMSTVAVHGFCFYAKHIADVGSKLGCANRIDLTSEMLASTTNTMALGKLSRQGLSKSTVIYTGKELELNSPINNMKKSENKASVFEVVQSIVPARISLALKGDIFNEYLSSLRQISRSEAVRVSQGVEKKRRGRSRGSQHYLSRCTMLSPEDITLVSDGDLYRKISSEYTTNLESKLL 1224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01532 1224 PANTHER CELL CYCLE CHECKPOINT PROTEIN RAD17 109 1219 IPR004582 GO:0006281
Car05g01532 1224 MobiDBLite consensus disorder prediction 774 796 - -
Car05g01532 1224 MobiDBLite consensus disorder prediction 1 90 - -
Car05g01532 1224 Gene3D - 584 648 - -
Car05g01532 1224 Gene3D - 324 575 IPR027417 -
Car05g01532 1224 PANTHER CHECKPOINT PROTEIN RAD17/RAD24-RELATED 109 1219 - -
Car05g01532 1224 CDD AAA 404 458 - -
Car05g01532 1224 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 325 632 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01532 Car-Chr5 59743299 59753044 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01532 323 629 Core DNA Replication Machinery Family AT5G22010 23.292 1.37e-10 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01532 - - gmx:100784209 1605.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01532 05 59743299 59753044 Car05g01532 05 59743299 59753044 ECH