Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01525 ATGCCTATAATGGAGAAAAATGGGAATGTCTTGATGAATAAATATGAGTTTGGAAAACTACTAGGCCAAGGAAACTTTGCAAAGGTTTACCATGCAAGGAACCTGATAACTGATGACATTGTTGCTATTAAGGTTATTGAGAAGGCGAAAGTCCGAAAAATCGGAATGGAGCTTCAAACGAAGCGAGAGATCTCTATCATGAGACTGATCAAACACCCGAATGTTTTGCGGCTTTATGAGGTTTTGGCCACCAAAAAAAAGATATACTTCATCATAGAATATGCCAAAGGAGGCGAGCTTTTCGCTAAGATAGCGAAAGGTAGACTTTCTGAGGACACTGCTAGGAAGTACTTCCAACAGTTGATGAGTGCTCTTGAATTTTGCCACAGAAAGGGTGTTTATCATCGGGATTTGAAGCCCGAAAACTTGCTGTTGGACGAACACGGAGACCTTAAAGTTGCTGACTTTGGATTGAGTGCGCTCGTAGAATCTCATAGCCGAAACAACATGCTGCAGACTGTTTGTGGAACTCCTGCGTATGTAGCTCCCGAGGTTGTACGCAGAAGGGGTTATAATGGAGCAAAAGCTGATGTTTGGTCATGTGGAGTGATCTTATATGCTCTTTTGACAGGTCACTTACCTTTCTATGATATGAATCTAATGTCATTGTATAAGAAAATAGGCAGGGGAGAATATGAATGCCCGGGCTGGTTTCCGGTCGAACTGCGCAGACTATTAGCTCGAATTCTTGATCCTAATCCATTTACTAGGATATCTACTGCCAAAATTTCGGAAAATACATGGTTCCGAAGAGGATTGGATACCAAATCTTTTCAAGTGAAAAGAGAGGTTACAAATGTGGCTGCAGTTGTTGATTCTGATAATGCTGTTACTGGCTTGTATGAAAATGGAAGTGATTCTGTTGAGGCAAATCAAGAAGCATTGGTTCTTCAACCAACATATCTTAATGCTTTTCATATACTTTCTCTGTCTGCTGGACTTGATTTGTCTGTCCTTTTTCCAAGTACTGATGAAAGGGAAGATATCAAATTTACATCCATGAGCTCGGCTGCGTCTATCATATCTGCAATAGAAGACATTGCTCACATTTTGAGGATGAAGGTAATTAAGAAGAATGGAGGGTTGATCAAATTGGAGAGGTCTAAGGAACATCATAAAGCGCCGCTTGTTATTACTGCTGAAATATTCGAGTTCGCTCCGTCTTTCTATCTGGTCGAGATAAAGAAGTCCTGTGGCGATGCATTGGAATACCAGGAGATATTGCAGGAACATATCAAACCTGGTCTCAAAGGTATTGTCTGGATTTGGCAAGGTGAGCTGAACAACAGTAGCATCAAGGTGGCGGTGTCTAGTTCTTAA 1380 0.4116 MPIMEKNGNVLMNKYEFGKLLGQGNFAKVYHARNLITDDIVAIKVIEKAKVRKIGMELQTKREISIMRLIKHPNVLRLYEVLATKKKIYFIIEYAKGGELFAKIAKGRLSEDTARKYFQQLMSALEFCHRKGVYHRDLKPENLLLDEHGDLKVADFGLSALVESHSRNNMLQTVCGTPAYVAPEVVRRRGYNGAKADVWSCGVILYALLTGHLPFYDMNLMSLYKKIGRGEYECPGWFPVELRRLLARILDPNPFTRISTAKISENTWFRRGLDTKSFQVKREVTNVAAVVDSDNAVTGLYENGSDSVEANQEALVLQPTYLNAFHILSLSAGLDLSVLFPSTDEREDIKFTSMSSAASIISAIEDIAHILRMKVIKKNGGLIKLERSKEHHKAPLVITAEIFEFAPSFYLVEIKKSCGDALEYQEILQEHIKPGLKGIVWIWQGELNNSSIKVAVSSS 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01525 459 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 5 447 - -
Car05g01525 459 CDD CIPK_C 323 437 - -
Car05g01525 459 Pfam NAF domain 319 377 IPR004041 GO:0007165
Car05g01525 459 ProSitePatterns Serine/Threonine protein kinases active-site signature. 133 145 IPR008271 GO:0004672|GO:0006468
Car05g01525 459 PANTHER - 5 447 - -
Car05g01525 459 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Car05g01525 459 Gene3D Transferase(Phosphotransferase) domain 1 6 320 - -
Car05g01525 459 SMART serkin_6 15 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g01525 459 Pfam Protein kinase domain 15 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g01525 459 ProSiteProfiles Protein kinase domain profile. 15 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g01525 459 Gene3D Kinase associated domain 1, KA1 321 442 - -
Car05g01525 459 ProSiteProfiles NAF domain profile. 317 341 IPR018451 GO:0007165
Car05g01525 459 SUPERFAMILY Protein kinase-like (PK-like) 11 291 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01525 Car-Chr5 59637063 59639352 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01525 4 446 CBL-interacting serine-threonine protein kinases AT5G58380 52.328 1.38e-178 506
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Car05g01525 Pkinase 3e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01525 K07198 - gmx:100816254 617.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01384 03 59078340 59083105 Car05g01525 05 59637063 59639352 ECH
Car05g01362 05 57559183 57561772 Car05g01525 05 59637063 59639352 ECH
Car02g01433 02 41179670 41181957 Car05g01525 05 59637063 59639352 ECH
Car05g01525 05 59637063 59639352 Car05g01525 05 59637063 59639352 ECH