Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01521 ATGGATTGTTGTGTGTGCACAACTATGCCATTAATATTAAGGCCTCCAAGGAATACAATATGTGGGGCTTGTTATGAAGGAGTTAGGAACATAATCAACATGATGAACGGTATTGAAAGTGAGAAATCAAAATCAATAATCACTCATCCAAATTCTCCAGTTTCGCCTCGAAATTCGAGTAAGACACTTGATGATTGTATAAGACGGTGTTCGGAGCAGATAGACCAATTTAATCAACAAAAACAAGACTTGGCTTTTCTTAGAGGATTTCTTGATGCCTTCAAAGAACAAATTCACACTGATATATTAATAAGTCCAGCCAATCATGGTCCACCTATACCTGCACATAAATCTGTTTTGGCTGCAAGATCAGAAATATTTAAGAACATGCTAGAGTGTGATGAATGTAAAGCTCCACCTAGTAACAATATTACCATACCCGATTTGAATCACGAAGAACTAGAGTCTCTCTTGGAATTTCTCTACAGTGGAACATTGACTTCGGAAAAATTGGAGAAACATGTTTATGCATTGTCACAAGCAGCTGATAAATATGTTATCCCACACTTGTTGAAATACTGTGAAAGATACCTTCTCAATTCAATTAGCACCTCTAATGCATTTGAGACACTAGAGATTGCTGATACTTGTTCCAACCATAATTTGAAGGAGACAACATTTAATTTCTTGGTTAAAAATATTGAGCATATGATTTCTTCCCCTAAATTTGAAGCTTTTGTACATAGGAGTCCACATTTGACTGTGCAATTAGTTACAAGGGCATTTGTTAATGGTTCCAAATAA 804 0.357 MDCCVCTTMPLILRPPRNTICGACYEGVRNIINMMNGIESEKSKSIITHPNSPVSPRNSSKTLDDCIRRCSEQIDQFNQQKQDLAFLRGFLDAFKEQIHTDILISPANHGPPIPAHKSVLAARSEIFKNMLECDECKAPPSNNITIPDLNHEELESLLEFLYSGTLTSEKLEKHVYALSQAADKYVIPHLLKYCERYLLNSISTSNAFETLEIADTCSNHNLKETTFNFLVKNIEHMISSPKFEAFVHRSPHLTVQLVTRAFVNGSK 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01521 267 SMART BTB_4 100 202 IPR000210 GO:0005515
Car05g01521 267 PANTHER BTB/POZ DOMAIN CONTAINING PROTEIN, EXPRESSED-RELATED 1 266 IPR044784 -
Car05g01521 267 Gene3D Potassium Channel Kv1.1; Chain A 68 198 IPR011333 -
Car05g01521 267 Pfam BTB/POZ domain 94 201 IPR000210 GO:0005515
Car05g01521 267 SUPERFAMILY POZ domain 84 202 IPR011333 -
Car05g01521 267 PANTHER BTB/POZ DOMAIN CONTAINING PROTEIN, EXPRESSED 1 266 - -
Car05g01521 267 Gene3D - 201 266 - -
Car05g01521 267 ProSiteProfiles BTB domain profile. 100 170 IPR000210 GO:0005515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Car05g01521 BTB 8e-21 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01521 K10523 - gmx:100777561 467.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01521 05 59598775 59600354 Car05g01521 05 59598775 59600354 ECH