Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01519 ATGTCGCCGTCTGCCGGAGTCCACGTCCCTCTCTTGACTGGATCTATACCGGCGGCGGAACATGGTTCTGTACCCGGCGCCGTATTTAACGTCGCCACAAGCATAATTGGCGCTGGAATCATGTCAATCCCAGCGATTCTAAAGGTTCTCGGCGTGATTCCCTCTTTTGCCTTGATTCTCATCGTTGCCGTTTTGGCTGAAGTTTCCGTGGACTTTCTCATGCGTTTTACGCATGCCGGTGAAACGACGACGTATGCTGGTGTTATGAGCGAGGCTTTTGGATCCGTTGGAGCATTAACCGCTCAAGTTTGTGTTATAATTACAAACTTTGGTGGTTTAATTCTCTACCTTATTATCATCGGGGATGTTTTATCTGGAAAGGAAGGTGGTGATGAATTGCATTTGGGAATTTTGCAGCAGTGGTTTGGGATTCACTGGTGGAATTCCCGGGAAGTTGCTCTTCTTATCACTTTGGTTCTTGTTATGCTTCCATTGGTCTTGTACAGACGTGTAGAATCCTTGAAGTACAGTTCTGCAATATCAACTCTTCTTGCTGTGGTATTTGTTGGCATTTGTTCTGGATTGGCTATAGTTGCTTTGGTGCAAGGAAAAACACAAACTCCTAGATTGGTTCCTCGATTAGACTACCAGACATCGTTCTTTGATTTGTTCACTGCAGTTCCTGTTGTAGTCTCAGCATTCACATTTCATTTCAATGTACATCCAATTGGTTTTGAGCTTGCAAAACCATCTGATATGAAAACAGCAGTTCGAATTGCAATAATGTTTTGTGCTGTTGTCTACTTCACAATTGGTCTATTTGGGTACCTCTTATTTGGAGATTCAACACAGTCAGATATTCTGATCAATTTTGATCAGAGTTCTGATTCTGTTGTTGGTTCTTTGTTTAATGGTTTAATTCGTGTAAGCTATGCACTCCACATCATGTTGGTATTCCCTCTTGTGAATTTCTCTTTAAGAGCCAACATTGATGAACTCTTATTCCCTAAGAAGCCTATAACCACAGACAACAAGAGATTTGTGATTCTCACTCTTGTGCTCCTAGTATTCTCCTATCTTGCTGCTATAGCAATTCCAGATATTTGGTACTTCTTTCAGTTTCTAGGATCAACAACTGCATTGTGCCTTGCATTCATTTTCCCTGGCACTATTGTTTTAAGGGATGCTCTTGGCATATCAACAAGAAAGGACAAAATAATAGCACTGGTTATGATTATACTTGCAGTAGTGACAAGTGTAATTGCCATTTCCACAAACATATACAATGCTTTAAGTAGCAAGTCATAA 1308 0.4113 MSPSAGVHVPLLTGSIPAAEHGSVPGAVFNVATSIIGAGIMSIPAILKVLGVIPSFALILIVAVLAEVSVDFLMRFTHAGETTTYAGVMSEAFGSVGALTAQVCVIITNFGGLILYLIIIGDVLSGKEGGDELHLGILQQWFGIHWWNSREVALLITLVLVMLPLVLYRRVESLKYSSAISTLLAVVFVGICSGLAIVALVQGKTQTPRLVPRLDYQTSFFDLFTAVPVVVSAFTFHFNVHPIGFELAKPSDMKTAVRIAIMFCAVVYFTIGLFGYLLFGDSTQSDILINFDQSSDSVVGSLFNGLIRVSYALHIMLVFPLVNFSLRANIDELLFPKKPITTDNKRFVILTLVLLVFSYLAAIAIPDIWYFFQFLGSTTALCLAFIFPGTIVLRDALGISTRKDKIIALVMIILAVVTSVIAISTNIYNALSSKS 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01519 435 Pfam Transmembrane amino acid transporter protein 22 421 IPR013057 -
Car05g01519 435 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 3 433 - -
Car05g01519 435 PANTHER AMINO ACID TRANSPORTER 3 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01519 Car-Chr5 59580415 59583170 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01519 1 429 Amino Acid or Auxin Permease AAAP Family AT3G56200 59.353 8.46e-178 502
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01519 - - gmx:100815694 695.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01519 05 59580415 59583170 Car05g01519 05 59580415 59583170 ECH
Car05g01519 05 59580415 59583170 Car02g01752 02 46643093 46644641 PCT
Car02g01753 02 46648944 46651628 Car05g01519 05 59580415 59583170 PCT