Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01491 ATGAGAAAGTGGAAATTCAGCTTCTTCAAGGATCTTCGTGCAGTTCTGTTCCTTGTATCGTTTTGTTTTTTGTTACAGAGCTTTGGTTTGTGCTGTTCTTTGAATGATGAAGGTAAAGCTCTTTTGAAGTTCAAGCAGGGAATTGTGAGTGACCCTTTTGATGCTTTGTCAAATTGGGTTGATGATGAAGTAGAGGTTGACCCTTGTAATTGGTTTGGGGTTGAGTGTTCTGATGGAAGAGTTGTGGTCTTGAATTTGAAAGACCTTTGTCTTGAAGGAAATCTAGCACATGAGCTTGGGAGCCTTGTACACATAAAGTCCATAGTTTTGCGGAATAATTCTTTTCATGGGATCATTCCTAAAGGAATTCTACGCTTGAAGGGATTGGAGGTTTTGGATTTGGGCTACAACAACTTCAGTGGACCTCTACCTAAAGATATTGGGAGTAATATCTCACTAACAATCCTTTTGCTGGACAACAATGATCTTCTTCATGGTTTCTCTCATGAAATTAATGAATTGACAATGCTTTCTGAATCTCAAGTAGACGAAAACCAGCTAGTTAGTGCAGGAAAATTGCCAGGTTGTACAGGAAGATCTGCCAAATGGCATATTCGCCAAAGTAGAGAAGGTGTTCGGAGCCTACTGCAGAAAAGTATTCCTGCTCGTGATGATCCTCATAATCGTGCAGCGATTCTTCCTGATAGCCCTTCTCTTTTGCCTtctccatcaccatcaccatcaccatcaccatctccatctccatctccatcttcatcttcatctccatctccatcACCTTCCCCATCTGTCTCAAAAAGACCACCAATAGTGACGAAGCCACCCACCCTGGATCAAAATGTTTCTGATTCTCCTTCTCCCCGGCCTGCACAAGGCTCTATACCACTATCCAAAAGCAACTCATCAAAGAAAGGTCACATGCCTATTTTGGCTGGGGTTGCGGGTGGTGCTGTATTTATTATCATTTCAATCATTGTCTTATATCTTTGTAAAACAAACAAGGTCGCTACCGTTAAACCATGGGTAACAGGATTAAGTGGACAACTTCAAAAGGCATTTGTGACAGGTGTGCCAAAGCTAAAGAGATCAGAGCTCGAAGCAGCATGTGAAGATTTTAGTAATGTAATTGATACTTCGCCCACTGGTACAGTTTACAAAGGGACTCTATCTAGCGGTGTCGAAATAGCTGTGGCCTCTGTTACAGTGACATCATTGAAAAATTGGTCAAAGACTTCAGAAGTCCAATTTCGTAAGAAGATTGATTCATTATCAAAGATGAACCACAAGAATTTTGCAAATCTCCTCGGATATTGCGAAGAAGACTTGCCTTTCACCAGAATGGTAGTTTTTGAGTATGCCCCAAATGGAACACTTTTTGAACATTTACACAGTGAGTACCTACCACTTTAG 1431 0.3878 MRKWKFSFFKDLRAVLFLVSFCFLLQSFGLCCSLNDEGKALLKFKQGIVSDPFDALSNWVDDEVEVDPCNWFGVECSDGRVVVLNLKDLCLEGNLAHELGSLVHIKSIVLRNNSFHGIIPKGILRLKGLEVLDLGYNNFSGPLPKDIGSNISLTILLLDNNDLLHGFSHEINELTMLSESQVDENQLVSAGKLPGCTGRSAKWHIRQSREGVRSLLQKSIPARDDPHNRAAILPDSPSLLPSPSPSPSPSPSPSPSPSSSSSPSPSPSPSVSKRPPIVTKPPTLDQNVSDSPSPRPAQGSIPLSKSNSSKKGHMPILAGVAGGAVFIIISIIVLYLCKTNKVATVKPWVTGLSGQLQKAFVTGVPKLKRSELEAACEDFSNVIDTSPTGTVYKGTLSSGVEIAVASVTVTSLKNWSKTSEVQFRKKIDSLSKMNHKNFANLLGYCEEDLPFTRMVVFEYAPNGTLFEHLHSEYLPL 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01491 476 Pfam Protein tyrosine and serine/threonine kinase 383 472 IPR001245 GO:0004672|GO:0006468
Car05g01491 476 SUPERFAMILY L domain-like 32 189 - -
Car05g01491 476 Gene3D Ribonuclease Inhibitor 33 209 IPR032675 -
Car05g01491 476 ProSiteProfiles Protein kinase domain profile. 377 476 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g01491 476 MobiDBLite consensus disorder prediction 282 311 - -
Car05g01491 476 Pfam Leucine rich repeat 104 163 IPR001611 GO:0005515
Car05g01491 476 MobiDBLite consensus disorder prediction 238 276 - -
Car05g01491 476 SUPERFAMILY Protein kinase-like (PK-like) 361 475 IPR011009 -
Car05g01491 476 Gene3D Phosphorylase Kinase; domain 1 350 459 - -
Car05g01491 476 MobiDBLite consensus disorder prediction 219 311 - -
Car05g01491 476 PANTHER BNAA09G55080D PROTEIN 2 472 - -
Car05g01491 476 Pfam Leucine rich repeat N-terminal domain 35 77 IPR013210 -
Car05g01491 476 PANTHER PROTEIN MALE DISCOVERER 2 2 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01491 Car-Chr5 59200005 59204064 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01491 16 465 Receptor kinase-like Gene Family AT1G66830 27.800 9.69e-29 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Car05g01491 PK_Tyr_Ser-Thr 1.5e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01491 - - gmx:100784541 593.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01491 05 59200005 59204064 Car05g01491 05 59200005 59204064 ECH
Car05g01491 05 59200005 59204064 Car02g01723 02 46335403 46339860 PCT