Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01486 ATGATAGAGCAACATAATAGGAAAAGTGAAATGAAAGGCATGAAAGGCTATGAACCACGTTCAAGCTCATCTTGTGCAGCTTGCAAGTTATTAAAAAGAAGATGCACACCTAATTGTATATTTGCACCTTACTTTCATTCAAACGAGTGCAAGAAATTTGCCAAAGTCCACAAAGTATTTGGAGCAAGTAATGTGAGCAAAATACTAATTGAAGTGCCAGAAAAACAAAGGGAAGACACAGTGAATTCTTTAGCTTATGAAGCAGAGGCAAGGCTTAGAGACCCAGTTTATGGATGCATTGGTGCTATAGCTTTGTTACAAAGGAAGATGATGGAACTTCAACATGATTTGGCTATTGCTAAGGATCGTCTTGCTCGTTGTCAtgctgctgctgttgcttctgctgctgctgctACAACCACTTTTTCTGTTGATACTTTGCATTCTCATGTTACTTTGCCTCCATTTCCTGACTTTTCACCTTCTAATGATATTTTCTGCCACAACAACTCTTCTTCTCAATTTTACACCCGAGATGAAACAGTGGATGATTTCAATCAAATACCATGTTTATTTTCATCTTTTGGTTCGCTTTTTTAA 600 0.3483 MIEQHNRKSEMKGMKGYEPRSSSSCAACKLLKRRCTPNCIFAPYFHSNECKKFAKVHKVFGASNVSKILIEVPEKQREDTVNSLAYEAEARLRDPVYGCIGAIALLQRKMMELQHDLAIAKDRLARCHAAAVASAAAATTTFSVDTLHSHVTLPPFPDFSPSNDIFCHNNSSSQFYTRDETVDDFNQIPCLFSSFGSLF 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01486 199 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 14 186 - -
Car05g01486 199 PANTHER LOB DOMAIN-CONTAINING PROTEIN 21 14 186 - -
Car05g01486 199 Pfam Lateral organ boundaries (LOB) domain 24 121 IPR004883 -
Car05g01486 199 ProSiteProfiles LOB domain profile. 23 124 IPR004883 -
Car05g01486 199 Coils Coil 103 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01486 Car-Chr5 59169110 59170024 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01486 14 189 AS2 family AT3G11090 57.955 1.69e-65 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Car05g01486 LOB 4.6e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01486 - - cam:101504923 385.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01486 05 59169110 59170024 Car05g01486 05 59169110 59170024 ECH