Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01485 ATGGGAAGTTCGGTGCGTGTTAAAGAAGCTGTGGTAGTCACACCTTCAGAGCCCACACCAAATGCTGTCCTGTTACTTTCACCACTCGACTCTCAACTTTTTCTCCGCTTCACTATAGAATATCTTCTACTTTACAGGCCCGGCCCGGGCCTCGACCAAGTGACCACCACTTCTCGTTTAAAAGCTGCATTAGCCAAAGCTCTTGTTCCTTATTACCCATTGGCTGGGAGAGTAAGGCCCAGACAAGATAATTCGGGCCTTGAGGTCTTGTGTAAAGCCCAAGGAGCGGTTTTCATCGAAGCAGTTAGTGACCGTTACACCGTCAACGACATCCAAAAAGTGCCAAAGACGGTTACGCAATGGAGGAAACTCTTGTCGCTCAGCGTCCCTGACGTTCTCAACGGATCTCCGCCGTTAGTCATTCAGCTGACGTGGCTCTCCGACGGCGGCGCAGCGTTAGGCGTCGGATTCAGCCACTGCATATGCGACGGCATCGGTAGCGCGGATTTTCTCAACTATCTAGCAGAATTGGCTTTAGGAAAACGCGGCAGTCCTAAAACGAAACCAGTCTGGGATCGCCACGTTTTCAATCTTTCGCAGCCGTTGAGTCGGGTTGACTCAGTGAGCCACCCCGAGTTCAACCAGGTTCCAGATCTATGCGGGTTTATGAACCGAGTCACGAATTCTCTCAGACCAACTTGCAATGTGTTTGATAAGAAACGGTTAAATGAGCTAAAAAGCGTGGCTCGTCGCACGTGTCAAGTAAGCGATTCTTCGTACACGTCGTTTGAAGTGCTTGCGGCACACGTGTGGAGGAGTTGGGCGAGAGCATTGGCGTTTCCACCCAACCAAACGCTGAAATTGTTGTTTAGCGTTAACGTGAGGAATCTGGTAAAAGCGGGTTTACCCGATGGGTATTATGGAAACGCGTTTGTTCTAGGGTGCGCGCAGACAAGTGCGAGAGAACTTGGGGAGAGAGGAATCGGGTACGGGTCGGGTTTagtgaagagagcgaaggagagagtggacagtgagcatgtgaggagagtgactgagtTGGTTTCCGAGTCAAGAGCGAGTCCTGACTTGGTGGGTGTGTTGATACTGTCGCAGTGGTCGAGGTTGGGTCTTGATCGGGTTGACCTGGGAATGGAGAAACCGGTGTTTGTGGGGCCCATTTGTAGTGATAGGTACTGTTTGTTTTTGCCGGTGAAGGGTGAAAGGGACGGCGTCAAGGTCACGGTGGCTGTTCCCGCAGCCGCCTTTGACAATTACCACCGTTTCCTCCGGGACTACTAA 1299 0.4927 MGSSVRVKEAVVVTPSEPTPNAVLLLSPLDSQLFLRFTIEYLLLYRPGPGLDQVTTTSRLKAALAKALVPYYPLAGRVRPRQDNSGLEVLCKAQGAVFIEAVSDRYTVNDIQKVPKTVTQWRKLLSLSVPDVLNGSPPLVIQLTWLSDGGAALGVGFSHCICDGIGSADFLNYLAELALGKRGSPKTKPVWDRHVFNLSQPLSRVDSVSHPEFNQVPDLCGFMNRVTNSLRPTCNVFDKKRLNELKSVARRTCQVSDSSYTSFEVLAAHVWRSWARALAFPPNQTLKLLFSVNVRNLVKAGLPDGYYGNAFVLGCAQTSARELGERGIGYGSGLVKRAKERVDSEHVRRVTELVSESRASPDLVGVLILSQWSRLGLDRVDLGMEKPVFVGPICSDRYCLFLPVKGERDGVKVTVAVPAAAFDNYHRFLRDY 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01485 432 Pfam Transferase family 4 422 - -
Car05g01485 432 Gene3D - 223 428 IPR023213 -
Car05g01485 432 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 6 428 - -
Car05g01485 432 Gene3D - 2 215 IPR023213 -
Car05g01485 432 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 6 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01485 Car-Chr5 59155256 59156836 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01485 5 429 Monolignol Biosynthesis Gene Families AT5G48930 26.196 1.91e-42 153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01485 05 59155256 59156836 Car05g01485 05 59155256 59156836 ECH