Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01473 ATGAAGAAACCACCTCCCTCCTCCCTCATCACCATCATATTCATCACCTTATTCATCTTCTCTTTACTACCCTCTTCTCATGCTTTAGGCTCCGCCACCACCATCGCCGTCACCGACAACCCCGCCACCGTATGCGGCATCATAACAAGCCAATCTACACAGCGCATTGACTGTTACCGTCAAGGAAAAGTCATCCCCGTTTCCCCCAACGTTTCATTTTCTTCCATCTCCGGTGGAAGAACCTTCTTCTGTGGCCTCAGGTCCGGTAACTTCAGTTTACATTGTTGGGATACTTCATCTTCCTTCCAAAGTAAAAGACTTTACGTTAGTGATTCTGTTTTATTGGAGAATCTCGCTGTTGGAGATTCTCAAGTTTGTGCTACGGTGGTTGGTGTTGGAACGGTTCGATGTTGGAGAACCAATTACGGCTTTGAACCAACTGGGTCGGTTCAATTCGCTTCAATTTCATCTGGGTCAAACTTCTCTTGTGGAATTGTGAAAAACGGTTCACAAGTTCGGTGTTGGGGGGAGAAAGTTGTTGCACAACGGTTACAGAATGAGTTTCGGAATATTTCTATGTTGAGTATTGTTGCTGGTGGTTCACATGTTTGTGGTTTGAATTCAACTGGTTTTTTGGTTTGTAAAGGAAGTAATGAATTTGGACAACTTGATGTTCCAAAAAGTGAAGCTTTTGAGTTTGCTGATTTGGCACTTGGTGATCAACATAGTTGTGCAATTAGAAGATTGAATGGTTCTGTTGTTTGTTGGGGTGGAAAGGGGAAATTTTCTGTTAATTTTATTCAAGGTGTTTCTTTTGAGTTAATTGTTTCTGGTTCTAATTTTATTTGTGGATTGTTAACAGCAAATTTTTCAGTTATTTGTTGGGGACCTGGTTGGTCTAATGCTAATGAAAATGGTTCTGTTCTTCCTTTGCCACGTATTCTACCAGGACCTTGTGTTCAATCTTCTTGTAGTCAATGTGGTTTATATCCTGATTCTCAATCTCTATGTTCTACTTCAACTCACATTTGCAAGCCAAATACTTGTGTGACTCAAATTACAAACCCTCCATCGTTGAAACCACCAATGCAACCGCCTccgccgccattgtctcctcctcgatcgtctcgatcgaagacattgacaagggggttattggtgtttgcaattgttggatcagttggatgttttattggtatctgcacaatagtttattgtttatggagtggtgtttgttttggtaaaaagaaagttcataattctgttcaaccaacagtcacaagaggtagtAGCAACAGTTCAAGTGGTAGCGCGTCTTCGATTAAATCCGCGATTATGCGCCAAGGTTCGAGAATAATGAGGCGTCAACGAAGTGGTCCATCATCAACAAAGCACCAAGAAAGTGCAGAGGAGTTTAGTCTTTCCGAGCTAATAGCAGCTACCAACAATTTCGCATTCGAGAACAAGATTGGTGCTGGAAGCTTTGGTGTTGTGTATAGAGGAAAACTAGTTGACGGTCGCGATGTAGCGATTAAGAGAGGCGAAACGAGTTTAAAGGTTAAGAAATTTCAAGAGAAAGAGAGTGCATTTGAGTCTGAATTAGCCTTTTTGTCGCGATTACACCACAAGCATTTGGTTAGGCTAGTTGGTTTTTGTGATGAGAAAGATGAGAGGCTTTTGGTGTATGAATACATGAAAAATGGTTCATTGCATAGTCATTTGCATGATAAGAACAATGTTGAAAAGAGTAGCAATGTTTTGAATTCATGGAAAATGAGGATCAAAATTGCTTTGGATGCTGCAAGAGGAATAGAGTATCTACATAACTATGCAGTTCCTTCAATAATACATAGAGATATTAAATCTTCAAACATTCTTCTTGATTCTACTTGGACAGCAAGAGTATCTGATTTTGGATTATCATTGATGAGTCCAGAATCTGATACTAATTACAAACCAACAAAAACAGCAGGAACAGTCGGATATATCGATCCGGAATACTATGGTTTAAATGTATTAACAGCAAAGAGTGATGTATATGGACTTGGAGTTGTGTTACTCGAACTATTAACCGGAAAAAGAGCGATTTTTAGGCACAGCGAAAATGGTGGAAATCCATTGAGTCTAGTTGATTTTGCAGTGCCTGCTATTTTGGCTGGTGAATTGGTGAAAATTTTGGACTCGAGAGTTGGATCGCCATCGGAGAGTAACGAATCCGAGGCGGTCGAGTTGATGGCATATACGGCCATTCATTGTGTGAATTTGGAAGGGAAAGATAGACCAACTATGGCTGATATTGTTGCTAATTTGGAGAGAGCTTTTGTTATTTGTGATGCTGGTAGTAACCATGAGATTGAAACCATTTCAAGTGTTACAATCACTGTTGTTTCAGATTGA 2397 0.37 MKKPPPSSLITIIFITLFIFSLLPSSHALGSATTIAVTDNPATVCGIITSQSTQRIDCYRQGKVIPVSPNVSFSSISGGRTFFCGLRSGNFSLHCWDTSSSFQSKRLYVSDSVLLENLAVGDSQVCATVVGVGTVRCWRTNYGFEPTGSVQFASISSGSNFSCGIVKNGSQVRCWGEKVVAQRLQNEFRNISMLSIVAGGSHVCGLNSTGFLVCKGSNEFGQLDVPKSEAFEFADLALGDQHSCAIRRLNGSVVCWGGKGKFSVNFIQGVSFELIVSGSNFICGLLTANFSVICWGPGWSNANENGSVLPLPRILPGPCVQSSCSQCGLYPDSQSLCSTSTHICKPNTCVTQITNPPSLKPPMQPPPPPLSPPRSSRSKTLTRGLLVFAIVGSVGCFIGICTIVYCLWSGVCFGKKKVHNSVQPTVTRGSSNSSSGSASSIKSAIMRQGSRIMRRQRSGPSSTKHQESAEEFSLSELIAATNNFAFENKIGAGSFGVVYRGKLVDGRDVAIKRGETSLKVKKFQEKESAFESELAFLSRLHHKHLVRLVGFCDEKDERLLVYEYMKNGSLHSHLHDKNNVEKSSNVLNSWKMRIKIALDAARGIEYLHNYAVPSIIHRDIKSSNILLDSTWTARVSDFGLSLMSPESDTNYKPTKTAGTVGYIDPEYYGLNVLTAKSDVYGLGVVLLELLTGKRAIFRHSENGGNPLSLVDFAVPAILAGELVKILDSRVGSPSESNESEAVELMAYTAIHCVNLEGKDRPTMADIVANLERAFVICDAGSNHEIETISSVTITVVSD 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01473 798 MobiDBLite consensus disorder prediction 355 377 - -
Car05g01473 798 Pfam Protein kinase domain 486 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g01473 798 Pfam Regulator of chromosome condensation (RCC1) repeat 153 176 - -
Car05g01473 798 SUPERFAMILY RCC1/BLIP-II 26 258 IPR009091 -
Car05g01473 798 Gene3D - 70 310 IPR009091 -
Car05g01473 798 MobiDBLite consensus disorder prediction 446 469 - -
Car05g01473 798 PANTHER SERINE/THREONINE-KINASE CCR4-LIKE PROTEIN 9 786 - -
Car05g01473 798 SUPERFAMILY Protein kinase-like (PK-like) 460 770 IPR011009 -
Car05g01473 798 ProSitePatterns Protein kinases ATP-binding region signature. 490 512 IPR017441 GO:0005524
Car05g01473 798 MobiDBLite consensus disorder prediction 358 374 - -
Car05g01473 798 Gene3D Phosphorylase Kinase; domain 1 445 564 - -
Car05g01473 798 ProSiteProfiles Protein kinase domain profile. 484 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g01473 798 SMART serkin_6 484 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g01473 798 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 9 786 IPR044815 GO:0004674
Car05g01473 798 Gene3D Transferase(Phosphotransferase) domain 1 565 784 - -
Car05g01473 798 MobiDBLite consensus disorder prediction 454 468 - -
Car05g01473 798 CDD STKc_IRAK 490 772 - -
Car05g01473 798 ProSitePatterns Serine/Threonine protein kinases active-site signature. 615 627 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01473 Car-Chr5 58961969 58964666 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01473 13 798 Receptor kinase-like Gene Family AT3G55950 58.693 0.0 825
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Car05g01473 Pkinase 1.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01473 - - gmx:100786639 1111.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g01702 02 46045643 46048042 Car05g01473 05 58961969 58964666 ECH
Car05g01473 05 58961969 58964666 Car05g01473 05 58961969 58964666 ECH