Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01469 ATGGCTTTCAGAGCCAGTGGAACACTGATTTTAGCTTGTCTCATTTGGATTTTCTTCCTCTGTGCAACCATAGCATTCTTTCAGCTCAAATTGGTCGAGAACAGAGCCAATCACGCTTCTTCTCATGACAAGTTAATTACTACTCATAATCATGATACCCTTTTGAAAGATGATTTAGAGGCTGTCACCCACAAAGTATATTTTGACATCGAGATCGATGGAAAATTAGCGGGTCGCATAGTCATGGGACTTTTTGGGACCACAGTACCAAAAACTGCAGGTATGCCATGCTACAGAGAGAAAGGGGTAGGAAGAAGTGGGAAGGCTCTTCATTATAAAGGGAGCACATTCCATAGGATAATACCAAGCTTCATGGTACAAGGGGGTGATTTCACCTTTGGTGATGGAAGAGGTGGAGAATCAATCTTTGGTGATAAGTTTGCTGATGAAAACTTCAAGGTGAAGCATTCTGGGCCAGGATACTTATCGATGGCAAATTCCGGCCAAGACACCAATGGCTCCCAGTTTTTCATAACGACAGTAAAAACCACCTGGCTGGACGGACGCCATGTTGTATTTGGCAAGGTACTTTCTGGTATGGATGTTTTGTACAAGATTGAAGCAGAAGGAAGTGAAAGTGGCTCTCCCAAACCCTTGCTAAAGAGGAAGGGAATTTTAGGGATTGCTTAA 690 0.4304 MAFRASGTLILACLIWIFFLCATIAFFQLKLVENRANHASSHDKLITTHNHDTLLKDDLEAVTHKVYFDIEIDGKLAGRIVMGLFGTTVPKTAGMPCYREKGVGRSGKALHYKGSTFHRIIPSFMVQGGDFTFGDGRGGESIFGDKFADENFKVKHSGPGYLSMANSGQDTNGSQFFITTVKTTWLDGRHVVFGKVLSGMDVLYKIEAEGSESGSPKPLLKRKGILGIA 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01469 229 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 41 217 - -
Car05g01469 229 Gene3D - 54 223 IPR029000 -
Car05g01469 229 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 112 129 IPR020892 GO:0003755|GO:0006457
Car05g01469 229 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 160 175 IPR002130 GO:0000413|GO:0003755
Car05g01469 229 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 175 187 IPR002130 GO:0000413|GO:0003755
Car05g01469 229 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 188 203 IPR002130 GO:0000413|GO:0003755
Car05g01469 229 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 117 129 IPR002130 GO:0000413|GO:0003755
Car05g01469 229 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 84 99 IPR002130 GO:0000413|GO:0003755
Car05g01469 229 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP21-2 41 217 - -
Car05g01469 229 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 67 218 IPR002130 GO:0000413|GO:0003755
Car05g01469 229 SUPERFAMILY Cyclophilin-like 61 217 IPR029000 -
Car05g01469 229 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 67 216 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01469 Car-Chr5 58931070 58934870 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01469 111 207 U-box Gene Family AT5G67530 54.082 8.37e-24 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01469 K01802 - gmx:100792649 344.354
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01469 05 58931070 58934870 Car05g01469 05 58931070 58934870 ECH