Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01464 ATGGGTGATAAATATAATATGCGACCCCATGTTTCTGGATGTTACGAAACAACTGTGTCAAATGGCAATGAGATATGGCAAAGTGAAAGTGTTCTAGTATTTTACCTTCCTAATTTTGCAGCTCAAGTTGCTTTCACATTGTTCTGTAATCGTGGTTTATACTACCTCCTTAGACCCTTCAATCAACCTCGCTTCGTTGTTGAGATATTGGTAGGTCTGATGGTAAGTCCTGAAATACTTGGGAGATACAAATTTTTCACAAATTTGATCCCTCTAAAGTCGGTGATAACGAGTGAAACGATATCCTATTTGGGACTTGTTTACTATGTTTTCCTGGCTGGTTTGGACATGAACTTGGAAACTATCATAAAAGCAAGAAAGAAAGCTACAAGCATTGCTGTTGCAGGAACTATAATTCCAATGGTAATAGGGAGTGCAGTATATACTTTACTTCAAAGCATGTACACTGGACCTCCTGAGTCTTTGTCACATTACAACACTCGTAAAGCTTATATGTTTTGGACCTTAATCTACTCTGTCACAGGTTTTCCTACTGTTACTCAAATCGTTACAGACTTGAAACTCCTCTATACAGGTCTAGGTAGAGTTGCTTTAACAGCAGCAATGATGACTGGCTTCTTCAATTGGGTTATGTTTGCATTTTTGATTCCTTTTGCACTCAATGAACAAGTTGCTATCTATTCAGTGCTAAGTACATTACTATTTGTCCTTGTTTGTTTCATCGTCATTCGCCCTTGTCTGGTTCAGTTAATCGTTCGGAAAACCAATCAGAATGAGTGGGACAATTACCAGTTGTTCTTTGTTGTTATGGGAGCTTATATTTGTGCAACTGTTACTGATATTCTTGGTACACACCCTGTTGTTGGAGCTTTGGTGTATGGAATAATGTTACCTTCCGGTAAATTTACTGATTTGTTGATAGATAAGACAGAGAGTTTTGGAGTTGTTTATCTTGCTCCACTTTTCTTTGCTAGTTGTGGTGTAAGACTCCAAATAATAGATGTCATACGATCTCAAGGTTTGGTCCTTGTAGTTCTAGTTGTGTTCTTGTCATGCATCTCCAAGATTTTAAGCACTGTCCTAGCAACTCAATTCTTTGGCATGCCTGCTCTTGATGGTGTGGCTATTGGAATTCTTATGAACACCAAAGGCATCTTACCTCTAATAATGCTCAACATTGCATGGGACAAGCAGATTTTGAGTGAAGAGTCTTTCTCAATTACATTGGTATCTGTTATTCTAATGACAGTAGTAGTGCCTCTTATCATCAATGCCATATACAAACCAAGAAAGTTATACAAGCAAAATAAGCTTAGGACGATACAAAACTTAAAGGTTGAAGCTGAGCTGAGAGTTTTGGCTTGTGTCCACAACCCTTGTCACGCTACAGGAATGATCAACATCCTTGAAGCTTCCAACGCCATAAAACTCTCTCCTTTACGTGTGTTCTCTCTTCAACTAGTTGAAATAACAGAAACCACAACATCCCTTTTAGCAGCACACAACAACCAACAACAAAGTGGATCACAAGCCCCCTCAAACTCAGTACAAGACTTAGAGAGCATAACACGCATTTTCAAAGACTATGAAGAGCAAAATGAAAACGCTAGTGTTGAAACACTTTCCGCAGTTTCTACCTATTCAACCATTCACAAAGACATACATAATGTGGCACAGGAAAAGCAAACAACATTGATTCTCCTTCCTTTTCACAAACAATCAAGTATACAAGGTGTTCTAGAAACAACCAACGAAGCATTTAAAGACATAAACCAAAATGTGATGAGAGATGCACCATGTTCTGTTGGAATCTTTGTTGATCGCGGTCTTGGTTCTTTGTTCAAAGTGAATTTACGCATACTTATGATTTTCATTGGCGGACCTGATGATCGCGAAGCTTTAGCATTTGCATGGAGGATGTCAAAGCATCGTGGAATTCAATTAACCGTTGTGAGATTTTATTTGTTGGGAGAGACTGCTGAAGTTGATCCATTACAACAATCAGAATCTAAAGGACTATTATCTACAGTGTTAGATTGGGAAAAACAGAAGGAGTTTGATGATGAATATGTGAGTTCTTTTAGACTCAAAGCAGTGAACAATGAAGATTCTATACATTATTCAGAAAAACAAGTTAATTCTTGGGAAGACATTCCTGAAGTGTTGAATGAATTGGACAAAAGTGGATATGATTTATACATTCTAGGACAAGGGACAGGTAGAAATTCTTTGGTCTTGTCAGATTTAGTGAAATGGACTGATTGTCCTGAACTTGGACTTATAGGGGACATGGTGGCATCAAATAGTTTTGGTTCATGTTCGTCACTACTTGTTGTACAACAATATGGTTTTGGAGGGATGGTATTTGAGAATACTACTCAACATCATAGTCAAGTGTCTGCCAACGATGATGATAATAGTAGTAGCGACTCTGAGACAGTTTATGTGAAGATAGAATAA 2481 0.3793 MGDKYNMRPHVSGCYETTVSNGNEIWQSESVLVFYLPNFAAQVAFTLFCNRGLYYLLRPFNQPRFVVEILVGLMVSPEILGRYKFFTNLIPLKSVITSETISYLGLVYYVFLAGLDMNLETIIKARKKATSIAVAGTIIPMVIGSAVYTLLQSMYTGPPESLSHYNTRKAYMFWTLIYSVTGFPTVTQIVTDLKLLYTGLGRVALTAAMMTGFFNWVMFAFLIPFALNEQVAIYSVLSTLLFVLVCFIVIRPCLVQLIVRKTNQNEWDNYQLFFVVMGAYICATVTDILGTHPVVGALVYGIMLPSGKFTDLLIDKTESFGVVYLAPLFFASCGVRLQIIDVIRSQGLVLVVLVVFLSCISKILSTVLATQFFGMPALDGVAIGILMNTKGILPLIMLNIAWDKQILSEESFSITLVSVILMTVVVPLIINAIYKPRKLYKQNKLRTIQNLKVEAELRVLACVHNPCHATGMINILEASNAIKLSPLRVFSLQLVEITETTTSLLAAHNNQQQSGSQAPSNSVQDLESITRIFKDYEEQNENASVETLSAVSTYSTIHKDIHNVAQEKQTTLILLPFHKQSSIQGVLETTNEAFKDINQNVMRDAPCSVGIFVDRGLGSLFKVNLRILMIFIGGPDDREALAFAWRMSKHRGIQLTVVRFYLLGETAEVDPLQQSESKGLLSTVLDWEKQKEFDDEYVSSFRLKAVNNEDSIHYSEKQVNSWEDIPEVLNELDKSGYDLYILGQGTGRNSLVLSDLVKWTDCPELGLIGDMVASNSFGSCSSLLVVQQYGFGGMVFENTTQHHSQVSANDDDNSSSDSETVYVKIE 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01464 826 PANTHER CATION/H + ANTIPORTER 19 808 - -
Car05g01464 826 Pfam Sodium/hydrogen exchanger family 53 433 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Car05g01464 826 Coils Coil 526 546 - -
Car05g01464 826 PANTHER CATION/H+ EXCHANGER 3 19 808 - -
Car05g01464 826 Gene3D - 478 753 - -
Car05g01464 826 Gene3D - 38 443 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01464 Car-Chr5 58893647 58896755 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01464 14 789 Antiporter Super Family AT2G13620 37.738 0.0 558
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01464 - - gmx:100802381 1110.52