Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01418 ATGTATCTTTTAGAGGGTCATAAACATGAAGTTGTTTTCATTTTATGGTTTTGTTGCTATTTATTACTGGTTGCTGCACAAGATAATATCACTGACCCCACTGAAGTTGAAGCATTAAAAGCCATAAAACAAAGGTTGATTGATCCTAATGGAAATTTGAGCAATTGGAATCATGGAGACCCGTGCACATCTCATTGGACAGGAGTTTTGTGTTTCAATGAAACATTAATAGATGGCTATTTACACGTTCAAGAATTGCAACTAATGAATTTGAACTTGTTCGGAAATTTGGCACCAGAAATTGGCAGCTTAGCTTATATGGAAAGATTGAACTTCATGTGGAACAATCTAACTGGGAGTATTCCAAAGGAAATTGGGAATATCAAATCTTTAATCCTCTTACTCCTGAATGGAAATCAATTAACAGGTTCACTGCCAGAGGAGCTTGGCTTTCTTCCAAACCTTGATAGAATACAAATCGATCAAAACAATATATCAGGATCTCTACCTACATCATTTGCAAACCTGAACAAGACAAAACACTTTCACATGAACAATAATTCAATTAGCGGGCAAATCCCACCGGAACTTTCCCGATTACCAAAACTTGTTCACTTCCTTCTTGACAACAACAACTTATCAGGATATCTTCCTCCCGAGCTTTCCAAATTGCCAAGCTTACTTATTCTTCAACTTGACAACAATAATTTCGACGGGAATAGCATTCCAGATACTTATAGCAACATGTCTAAATTGTTGAAGTTGAGCCTTAAGAATTGCAACTTGCAAGGACCGATTCCTGACTTAAGCCGTATACCAAATCTTCTTTATCTTGACCTCAGTTCCAATCGGTTGAATGAATCACTTCCTTCCACACTTTCAGAAAACATCACAACTATTGATTTTTCAAACAACAAGCTTACTGGAACCATTCCGCCCTCCTTTTCTAGTCTTCCACATCTTCAGAGATTGTCTCTTGCAAACAATTCATTGAATGGCGTTGTTCCCTCCACGATTTGGCAGGATAAGACTTTAAATGGAACAGAAAGATTTATCTTGGAGTTGGAAAATAATCGATTTACAACTGTATCAGGCAATATCAATCTTCCTCCAAATGTCACAGTCTTTCTTGACGGGAATCCTCTATGCTCAAATAACACCCTGAGTCAGCTCTGTAGTTCCGAAGGCGTTAATGACACAAACGACCTCATTCGAACAAACGCCAATGGTTTCTGTCCTGCTCAATCATGCCCGCCTCCTTATGAATACTCTTTGGATTGTTTCTGTGCAGCACCATTGCTTGTTGATTATCGACTGAAAAGTCCGGGGTTTTCAGATTTCCTTCCATACATAGACGATTTTGAGAAATACATGACTACTGGTCTTACTATAAATATGACTCAACTAAACTTTACTTTTCATTGGGAAGCAGGACCTCGATTGAGAATGAACTTGAAGTTTTTTCCTTTATATGTTGATCAAAATAGTTCCCATACTTTCGATGAAACTGAGGTCATGCGAATTAAAAGCATGTTCACAGGATGGAATATTCCTGACAGTGATTTGTTTGGACCATATGAATTGCTGAACTTCAATCTGGGCTTTTACCTGAATGTGACTGCCACCTCTTCAAAATCGGGGATAAGCACGGGAGCAATAGTCGGCATAGTCTTAGGGACGATTGCCTTTGCAGTGACGCTATCTGCAATTGTTACTCTTCTTATATTAAGAACAAAATTGAGAGATTATCGTGTAGTTTCCAAAGGGCGTCATGTGTCTAAAATCTCGATAAAAATTGATGGCGTAAGGGCCTTTACATATGAAGAATTGTCCTCCGCTACGAACAATTTTAGCAGCTCTGCTCAAGTCGGACAAGGGGGCTACGGGAAGGTATATAAAGGTATTATTTCTGACGGCACAGTTGTTGCCATAAAACGTGCACAAGAGGGATCCCTGCAAGGCGAGAAGGAGTTCCTTACAGAAATATCATTACTATCACGGTTACATCATCGCAACCTTGTGTCTCTAATTGGATACTGTGATGAAGAAGGTGAACAGATGCTGGTTTATGAATATATGCCAAATGGAACACTCAGGGATCACCTTTCTGCTACATCAAAAGAACCTCTAACATTTGCCATGAGATTAAAGATGGCACTAGGGGCAGCTAAAGGTCTCATGTATCTACACACAGAAGCTGATCCTCCAATATTTCACCGAGATGTCAAGGCCAGCAACATATTATTGGACTCTAAGCTCTCTGCAAAAGTGGCAGATTTCGGACTTTCGCGGCTTGCCCCAGTTCCAGATATGGAAGGAATTGTGCCTGGTCATGTATCTACAGTCGTAAAGGGGACACCGGGTTACCTTGATCCAGAGTACTTCTTAACTCACAAGTTGACCGACAAGAGTGATGTTTATAGTCTTGGTGTTGTGTTTTTGGAACTTCTGACTGGGATGCATCCTATCTCACATGGCAAAAATATTGTTAGAGAGGTCAACCTTTCATACCAATCCGGCGTGATATTTTCAATTATTGATGCACGTATGGGGTCTTATCCATCTGAGCACGTCGAGAAATTTTTGAGTTTAGCTCTCAAGTGTTGTAACGATGAGCCAGATAATCGGCCTAGAATGACCGAAGTGGTTCGAGAACTCGAAAACATATGGAATGTGATGCCGGAATCAGATACAAGGAGAGCTGAATCTTTAACCAGTGTCAGTGATTCTAGTAAAGCAATTAGTACACCATCTTCATCTTCTGCTATGAGGACTCCTTTTGTATCAGGTGATGTTTCAGGGAGTGACCTTGTTAGTGGAGTAATACCAAGCATCAAGCCAAGATAG 2847 0.4004 MYLLEGHKHEVVFILWFCCYLLLVAAQDNITDPTEVEALKAIKQRLIDPNGNLSNWNHGDPCTSHWTGVLCFNETLIDGYLHVQELQLMNLNLFGNLAPEIGSLAYMERLNFMWNNLTGSIPKEIGNIKSLILLLLNGNQLTGSLPEELGFLPNLDRIQIDQNNISGSLPTSFANLNKTKHFHMNNNSISGQIPPELSRLPKLVHFLLDNNNLSGYLPPELSKLPSLLILQLDNNNFDGNSIPDTYSNMSKLLKLSLKNCNLQGPIPDLSRIPNLLYLDLSSNRLNESLPSTLSENITTIDFSNNKLTGTIPPSFSSLPHLQRLSLANNSLNGVVPSTIWQDKTLNGTERFILELENNRFTTVSGNINLPPNVTVFLDGNPLCSNNTLSQLCSSEGVNDTNDLIRTNANGFCPAQSCPPPYEYSLDCFCAAPLLVDYRLKSPGFSDFLPYIDDFEKYMTTGLTINMTQLNFTFHWEAGPRLRMNLKFFPLYVDQNSSHTFDETEVMRIKSMFTGWNIPDSDLFGPYELLNFNLGFYLNVTATSSKSGISTGAIVGIVLGTIAFAVTLSAIVTLLILRTKLRDYRVVSKGRHVSKISIKIDGVRAFTYEELSSATNNFSSSAQVGQGGYGKVYKGIISDGTVVAIKRAQEGSLQGEKEFLTEISLLSRLHHRNLVSLIGYCDEEGEQMLVYEYMPNGTLRDHLSATSKEPLTFAMRLKMALGAAKGLMYLHTEADPPIFHRDVKASNILLDSKLSAKVADFGLSRLAPVPDMEGIVPGHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMHPISHGKNIVREVNLSYQSGVIFSIIDARMGSYPSEHVEKFLSLALKCCNDEPDNRPRMTEVVRELENIWNVMPESDTRRAESLTSVSDSSKAISTPSSSSAMRTPFVSGDVSGSDLVSGVIPSIKPR 948
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01418 948 Gene3D Ribonuclease Inhibitor 33 187 IPR032675 -
Car05g01418 948 SMART serkin_6 617 889 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g01418 948 Gene3D Ribonuclease Inhibitor 188 290 IPR032675 -
Car05g01418 948 Pfam Protein kinase domain 619 884 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g01418 948 SUPERFAMILY Protein kinase-like (PK-like) 602 910 IPR011009 -
Car05g01418 948 ProSitePatterns Serine/Threonine protein kinases active-site signature. 737 749 IPR008271 GO:0004672|GO:0006468
Car05g01418 948 Gene3D Transferase(Phosphotransferase) domain 1 693 913 - -
Car05g01418 948 Pfam Leucine rich repeat N-terminal domain 33 71 IPR013210 -
Car05g01418 948 Gene3D Ribonuclease Inhibitor 291 409 IPR032675 -
Car05g01418 948 MobiDBLite consensus disorder prediction 900 928 - -
Car05g01418 948 ProSiteProfiles Protein kinase domain profile. 617 891 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g01418 948 ProSitePatterns Protein kinases ATP-binding region signature. 623 645 IPR017441 GO:0005524
Car05g01418 948 CDD STKc_IRAK 623 889 - -
Car05g01418 948 Gene3D Phosphorylase Kinase; domain 1 588 692 - -
Car05g01418 948 SUPERFAMILY L domain-like 46 394 - -
Car05g01418 948 SMART LRR_typ_2 272 296 IPR003591 -
Car05g01418 948 SMART LRR_typ_2 152 175 IPR003591 -
Car05g01418 948 SMART LRR_typ_2 318 341 IPR003591 -
Car05g01418 948 SMART LRR_typ_2 200 223 IPR003591 -
Car05g01418 948 SMART LRR_typ_2 224 248 IPR003591 -
Car05g01418 948 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 11 919 - -
Car05g01418 948 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 11 919 - -
Car05g01418 948 MobiDBLite consensus disorder prediction 900 935 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01418 Car-Chr5 58389410 58398547 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01418 18 899 Receptor kinase-like Gene Family AT5G01950 58.751 0.0 1004
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Car05g01418 Pkinase 2.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01418 - - gmx:100786467 1472.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01418 05 58389410 58398547 Car05g01418 05 58389410 58398547 ECH
Car05g01418 05 58389410 58398547 Car02g01461 02 41746159 41754097 PCT