Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01414 ATGAAGTTTGATTCTGCTTCAGTGGCTTCTTTCCTTTTTGTCATAGCTATTCTTTTACCTCTTGCTATTTCCGACCTTAATTCCGATAAGCAAGCCCTTCTCGATTTTGCCAATGCCGTGCCGCACCGTCGAAACCTGATGTGGGATCCATCCACCTCAATCTGTACATCTTGGATAGGCATCACTTGCAATCAAAATGGAACTCGAGTTGTTAATGTCCGGCTCCCTGGAATCGGACTAATTGGCTCCATTCCATCCAATACACTTGGAAAGCTTGATGCCTATCTCTACCTCCAACATAATAACTTTTCTGGTGATATTCCTACTTCATTGTCAGACCAACTAATTGTACTTGATTTGTCTTATAATTCTTTCACCGGTAGAATTCCGAAGACATTACAAAATTTGACAGAACTAAATAGTTTGGATCTCCAAAACAACTCGTTATCCGGAAGCATACCTAATCTCAATGTTACTAAGCTCGGAAAATTGAATTTAAGCTACAATAATTTGAGTGGACCTATCCCTTCATCCCTCCACATTTATCCAAATTCGACGTTTGTAGGAAACTCTCTTTTATGTGGACCACCTCTAAAGCCATGCTCGAAGACGGTTTCCCCTACACCTCCTCCTGCATTGACTCCTCCAGCTACTGGAAAACAAAGCTCGAAAAGTAAATTGAGTAAAGTAGCTATCATTGCCATTGCGGTTGGAGGAGCCGTGCTGCTATtttttgtagttcttgttattgtgatttgttgttgttTGAAGAAGAAGGACGAAGGAGGCTCCAGAGAAGTTAAAGGGAAGGGTCCTAGTGGTGGTGGCGGGGGTGGTAGGGGCGACAAGCCAAGAGAAGAGTTCGGGAGTGGAGTGCAAGAACCTGAGAAGAACAAGTTGGTTTTCTTTGAGGGAAGTTCTTATAATTTTGATCTTGAAGACTTGCTTAGAGCTTCAGCCGAAGTTCTCGGAAAAGGTAGCTATGGTACGTCATATAAGGCTATATTGGAGGAATCAATGACAGTTGTGGTGAAAAGGTTGAAAGAAGTTGTGGTTGGCAAAAAAGAATTTGAACAGCAGATGGAGATTATAGGAAGGGTTGGACAAAACACAAATGTTGTGCCACTTCGCGCTTATTATTATTCAAAAGATGAAAAGCTTTTGGTTTATGACTATGTCCCTGCTGGCAACCTATCCACAATCTTGCATGGAAGTCGAGCAGGTGGAAGAACTCCATTAGATTGGGACTCGAGAGTAAAAATATCCCTCGGAACTGCGAGAGGAATTGCTCACATCCATTCTGTTGGTGGTCCAAAATTCACACATGGAAATATCAAGTCCTCAAATGTCCTCCTCAACCAAGATAACGATGGCTGCATTTCTGATTTTGGCCTGGCCGCACTTATGAACGTTCCAGCAACCCCTTCTAGAGCTGCAGGCTATCGCGCTCCTGAGGTGATTGAAACTCGTAAGCACTCTCATAAATCAGATGTCTACAGCTTTGGCGTCCTCCTTCTAGAGATGCTTACAGGAAAGGCGCCTCTCCAATCTCCTGGACGCGATGACATGGTCGATCTCCCTCGGTGGGTTCAGTCTGTTGTTCGAGAGGAGTGGACAGCCGAGGTTTTTGATGTCGAACTAATGAGGTACCAAAACATCGAAGAAGAAATGGTGCAAATGTTGCAAATCGCCATGGCGTGTGTAGCAAAGATGCCTGATATGAGACCTAGTATGGACGAAGTGGTGAGAATGATCGAAGAGATTCGGCTATCTGACTCAGAGAACCGACCGTCTTCCGAAGAGAATAAATCTAAGGACTCAAATGTTCAAACTCCATAG 1839 0.4318 MKFDSASVASFLFVIAILLPLAISDLNSDKQALLDFANAVPHRRNLMWDPSTSICTSWIGITCNQNGTRVVNVRLPGIGLIGSIPSNTLGKLDAYLYLQHNNFSGDIPTSLSDQLIVLDLSYNSFTGRIPKTLQNLTELNSLDLQNNSLSGSIPNLNVTKLGKLNLSYNNLSGPIPSSLHIYPNSTFVGNSLLCGPPLKPCSKTVSPTPPPALTPPATGKQSSKSKLSKVAIIAIAVGGAVLLFFVVLVIVICCCLKKKDEGGSREVKGKGPSGGGGGGRGDKPREEFGSGVQEPEKNKLVFFEGSSYNFDLEDLLRASAEVLGKGSYGTSYKAILEESMTVVVKRLKEVVVGKKEFEQQMEIIGRVGQNTNVVPLRAYYYSKDEKLLVYDYVPAGNLSTILHGSRAGGRTPLDWDSRVKISLGTARGIAHIHSVGGPKFTHGNIKSSNVLLNQDNDGCISDFGLAALMNVPATPSRAAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPGRDDMVDLPRWVQSVVREEWTAEVFDVELMRYQNIEEEMVQMLQIAMACVAKMPDMRPSMDEVVRMIEEIRLSDSENRPSSEENKSKDSNVQTP 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01414 612 Pfam Leucine rich repeat 95 149 IPR001611 GO:0005515
Car05g01414 612 PANTHER OS05G0588300 PROTEIN 2 94 - -
Car05g01414 612 PANTHER OS05G0588300 PROTEIN 95 612 - -
Car05g01414 612 Gene3D Phosphorylase Kinase; domain 1 286 392 - -
Car05g01414 612 CDD STKc_IRAK 323 588 - -
Car05g01414 612 ProSiteProfiles Protein kinase domain profile. 317 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g01414 612 Gene3D Ribonuclease Inhibitor 92 206 IPR032675 -
Car05g01414 612 SUPERFAMILY L domain-like 28 199 - -
Car05g01414 612 SUPERFAMILY Protein kinase-like (PK-like) 321 595 IPR011009 -
Car05g01414 612 MobiDBLite consensus disorder prediction 589 603 - -
Car05g01414 612 Pfam Leucine rich repeat N-terminal domain 27 64 IPR013210 -
Car05g01414 612 Gene3D Transferase(Phosphotransferase) domain 1 393 611 - -
Car05g01414 612 Gene3D Ribonuclease Inhibitor 26 91 IPR032675 -
Car05g01414 612 PANTHER LRR RECEPTOR-LIKE KINASE 2 94 - -
Car05g01414 612 PANTHER LRR RECEPTOR-LIKE KINASE 95 612 - -
Car05g01414 612 MobiDBLite consensus disorder prediction 262 292 - -
Car05g01414 612 ProSiteProfiles Leucine-rich repeat profile. 138 160 IPR001611 GO:0005515
Car05g01414 612 MobiDBLite consensus disorder prediction 589 612 - -
Car05g01414 612 Pfam Protein kinase domain 320 583 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01414 Car-Chr5 58249791 58252257 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01414 3 610 Receptor kinase-like Gene Family AT5G58300 63.975 0.0 809
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Car05g01414 Pkinase 6.9e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01414 - - gmx:100796171 970.304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01414 05 58249791 58252257 Car05g01414 05 58249791 58252257 ECH
Car05g01414 05 58249791 58252257 Car02g01459 02 41708750 41713524 PCT