Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01407 ATGGCTGATGAAGCACAAATTGATGTGAAGGAGGAGGTTCCTGATATTGCACCATTTGATCCTACTAAAAAGAAGAAGAAAAAGAAACCCCTAATTGTAGATCTTGATGATGATTCAGTGGACAAGTTGGCTGAGAAAACAGAAAATCTGTCGGTTTCTGAGGGATTTGACAGTACGTTAGCTGGTGCgaaaaagaagaagaagaagCCTGTTGATATCAGTAACTTAATTGATGAGAGTGGTGATGCAAAAATTGATGATTTGGAGGATCATGTTGAAGAAGATGACAGTGATGCTGTTTCCTTGCAACCTCGTTACCCTTGGGAAGGGAGTGATCGTGATTATCACTACGAGGAGCTTTTGGGCAGGGTGTTTAACATTCTACGTGAGAATAATCCAGAACTTGCTGGAGACAGGCGTAGGACTGTTATGAGGCCTCCACAAGTGCTTCGTGAAGGCACAAAGAAAACTGTTTTTGTGAATTTTATGGACCTTTGCAAAACGATGCATCGTCAGCCAGATCATGTTATGGCTTTCTTGCTTGCGGAATTGGGTACAAGTGGCTCTCTAGATGGACAGCAAAGATTGGTTGTGAAGGGAAGATTTGCACCAAAGAATTTTGAAGGAATTTTGCGACGATATGTCAATGAATATGTCATTTGCCTTGGATGCAAAAGTCCGGACACAATACTTTCTAAGGAGAACCGATTGTTCTTTCTCCGTTGTGAAAAGTGTGGATCAGGAAGATCAGTTGCACCGATCAAAGCTGGTTTTGTTGCTCGTGTTGGCCGTAGGACCGCAGGGGGGACATGA 813 0.4207 MADEAQIDVKEEVPDIAPFDPTKKKKKKKPLIVDLDDDSVDKLAEKTENLSVSEGFDSTLAGAKKKKKKPVDISNLIDESGDAKIDDLEDHVEEDDSDAVSLQPRYPWEGSDRDYHYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILSKENRLFFLRCEKCGSGRSVAPIKAGFVARVGRRTAGGT 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01407 270 MobiDBLite consensus disorder prediction 1 30 - -
Car05g01407 270 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 1 266 IPR045196 GO:0003743|GO:0006413
Car05g01407 270 SMART eIF2Bneu4 139 248 IPR002735 GO:0003743|GO:0006413
Car05g01407 270 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 114 221 IPR016189 GO:0003743|GO:0006413
Car05g01407 270 PANTHER BNAA02G05130D PROTEIN 1 266 - -
Car05g01407 270 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 218 253 IPR016190 GO:0003743|GO:0006413
Car05g01407 270 Pfam Domain found in IF2B/IF5 138 247 IPR002735 GO:0003743|GO:0006413
Car05g01407 270 Gene3D - 112 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01407 Car-Chr5 58175038 58178707 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01407 1 265 Eukaryotic Initiation Factors Gene Family AT5G20920 72.761 4.43e-129 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01407 K03238 - gmx:100783618 445.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01407 05 58175038 58178707 Car05g01407 05 58175038 58178707 ECH