Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01405 ATGACTTCTCATCATATCCAATATTTCATCACCGTTTTCTTAACAGCCACAACATTTGTCACATTAATTCATTCTCATTCCTATGCACAACTAACTTCTGATTTTTACGATGATGTTTGTCCTCAAGCATTGCCAATCATTCACTCCATTCTTCACAAATTTATGTCCATTAAACCACGCATGGGAGCACATTTACTGCGCTTGCATTTCCATGACTGTTTTGTCAATGGGTGTGATGGATCGGTTCTGTTGGATGATAGTCCTACCTTCATAGGTGAAAAGAGTGCCATCTCAAATATTGATTCTCTTAGAGGCTTTTGGATGATTGATAATCTTAAAGAAGCTGTTGACAAAGCTTGTAATCGCTCTGTCGTATCATGTGCAGATATATTGGCCATAGCTGCTCGTGACTCTGTCTCCATTTTGGGTGGTCCAAACTATTGGTACAAAGTGCTACTAGGAAGAAGAGATGCTAAAATTGCTTCAAAGAAAGATGCTGATCTTAATCTTCCTACCCAAAATTTCAATTACTCTCAACTTGTTTCTAATTTTAAGTCTAAAGGGCTAAACCTTAAAGATCTTGTAGTTCTATCTGGTGCACACACTATTGGATTAGCTAGATGTACTACCTTTAAGGACAGGATCTACAATGACACCAACATAGACCCTAATTTTGCAATTTCCTTACAAAGGATATGTCCTATAAATGGTGGTGATGACAATTTGGAATATCCATTTGATAATGTTACATCAAAAGTTTTTGACAACTCATATTATATGGATTTAATTGGTAAAGAAGGTCTTCTCCATTCTGATCAAGAACTCTTTAAGGGAGATGGTAGTCAAAGTGACAAGTTGGTGAGATTTTATAGTAGAAATCCACATGCTTTTGCAAGAGATTTTAAAGCTTCCATTATTAAAATGGGTAACATTGAGCCTCTTACTGGAATCTTTGGAGAGATTAGAACCAATTGTAGTAAAGTCAATTGA 990 0.3606 MTSHHIQYFITVFLTATTFVTLIHSHSYAQLTSDFYDDVCPQALPIIHSILHKFMSIKPRMGAHLLRLHFHDCFVNGCDGSVLLDDSPTFIGEKSAISNIDSLRGFWMIDNLKEAVDKACNRSVVSCADILAIAARDSVSILGGPNYWYKVLLGRRDAKIASKKDADLNLPTQNFNYSQLVSNFKSKGLNLKDLVVLSGAHTIGLARCTTFKDRIYNDTNIDPNFAISLQRICPINGGDDNLEYPFDNVTSKVFDNSYYMDLIGKEGLLHSDQELFKGDGSQSDKLVRFYSRNPHAFARDFKASIIKMGNIEPLTGIFGEIRTNCSKVN 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01405 329 CDD secretory_peroxidase 30 328 IPR033905 GO:0004601|GO:0042744
Car05g01405 329 SUPERFAMILY Heme-dependent peroxidases 30 329 IPR010255 GO:0004601|GO:0006979|GO:0020037
Car05g01405 329 PANTHER CATIONIC PEROXIDASE 12 328 - -
Car05g01405 329 Gene3D Peroxidase, domain 2 171 308 - -
Car05g01405 329 PANTHER PEROXIDASE 72-RELATED 12 328 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car05g01405 329 Gene3D - 34 326 - -
Car05g01405 329 ProSitePatterns Peroxidases proximal heme-ligand signature. 193 203 IPR019793 -
Car05g01405 329 ProSitePatterns Peroxidases active site signature. 62 73 IPR019794 GO:0004601
Car05g01405 329 Pfam Peroxidase 51 292 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car05g01405 329 PRINTS Haem peroxidase superfamily signature 62 76 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car05g01405 329 PRINTS Haem peroxidase superfamily signature 125 142 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car05g01405 329 PRINTS Haem peroxidase superfamily signature 145 157 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car05g01405 329 PRINTS Haem peroxidase superfamily signature 193 208 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car05g01405 329 PRINTS Haem peroxidase superfamily signature 247 262 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car05g01405 329 PRINTS Plant peroxidase signature 40 59 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car05g01405 329 PRINTS Plant peroxidase signature 64 84 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car05g01405 329 PRINTS Plant peroxidase signature 104 117 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car05g01405 329 PRINTS Plant peroxidase signature 124 134 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car05g01405 329 PRINTS Plant peroxidase signature 192 204 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car05g01405 329 PRINTS Plant peroxidase signature 245 260 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car05g01405 329 PRINTS Plant peroxidase signature 261 278 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car05g01405 329 PRINTS Plant peroxidase signature 303 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car05g01405 329 ProSiteProfiles Plant heme peroxidase family profile. 30 329 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01405 Car-Chr5 58169701 58171527 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01405 29 329 Peroxidase AT5G05340 54.455 1.17e-113 330
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01405 K00430 - gmx:100816580 426.017