Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01403 ATGGATCTCCTCCTCGTAGAGAAGATCCTAACTGCCATCTTCGTAGCCGCCCTCCTCGCAATTCTCGCTGCAAAACTCCGCGGCAAACGATTCAAACTCCCGCCGGGGCCATTCCCAGTGCCGATTTTCGGCAACTGGCTCCAAGTCGGCGACGACCTCAACCACCGCAACCTCACGGAACTATCAAAAAAATACGGCGAAATTTTCCTCCTCCGAATGGGACAACGCAACCTCGTGGTGGTTTCATCCCCAAAACTAGCAAAAGAAGTTCTCCACACACAAGGAGTAGAATTCGGCTCCCGAACGCGTAACGCCGTCTTCGATATTTTCACCGGAAAAGGACAAGACATGGTGTTCACAATCTACGGTGAGCATTGGCGGAAAATGCGGCGGATTATGACGGTTCCGTTTTTCACAAACAAAGTTGTGCAGCAGTATCGGAGTGGATGGGAGGATGAGGCGGCTAGCGTTGTTGAAGATGTGCGGCAGAATCCGGTGGCAGGAACGACGGGGATTGTTTTGCGGCGGCGGTTGCAGTTGTTGATGTATAATAATATGTATAGGATAATGTTTGATAGAAGATTCGAGAATGAGGAAGATCCTTTGTTTAAAAAGCTTAAGGTTGTTAATAGTGAGAGGAGTCGTTTGTCTCAAAGCTTTGAATATAACTATGGTGATTTTATTCCTGTTTTGAAACCGTTCTTGCGTCGGTATTTGAAGGTTTGTAAGGATGTTAAGGATCGTAGGTTTCAACTCTTCAAAGACTATTTCGTTGAACACAGAAAGAAGCTTGGGAGTATTAGGAGAACAGAAAATGAAGGACTAAAGTGTGCAATGGATCACATTTTGGATGCTCAGAAAAAGGGTGAAATTAATGAGGACAACGTTCTTTACATTGTTGAGAACATTAACGTTGCTGCTATTGAGACAACTCTATGGTCAATTGAATGGGGCATTGCAGAGCTAGTGAACCACCCTTCAATCCAAAACAAACTCAGAGATGAAATCGACAAAATTCTCGGCCCTAAACACCAAGTAACAGAACAAGACACACACAAACTCCCTTACCTACAAGCTATTATCAAGGAAACACTTCGTCTTAGAATGTCAATTCCACTCCTTGTCCCACACATGAACCTTCATGATGCAAAGCTTGCTAACAATCCTGTTCATTGGAAAAACCCTGAGGAGTTTAGGCCTGAGAGGTTTTTGGAGGAAGAGTCCAAAGTTGAGGCTAATGGGAATGATTTTAGGTTCTTACCTTTTGGTGTTGGGAGAAGGAGTTGTCCTGGAATTATTCTTGCTTTGCCTATAATTGGCATTACTTTGGGTCGTTTGGTTCAAAATTTTGAGCTATTGCCTCCTCCAGGGGAGTCTAAGATTGATACTACTGAGAAAGGTGGACAATTTAGTTTGCATATATTGAAACATTCTACTATTGTGTTAAAGCCAAGATCATTTTAG 1464 0.4351 MDLLLVEKILTAIFVAALLAILAAKLRGKRFKLPPGPFPVPIFGNWLQVGDDLNHRNLTELSKKYGEIFLLRMGQRNLVVVSSPKLAKEVLHTQGVEFGSRTRNAVFDIFTGKGQDMVFTIYGEHWRKMRRIMTVPFFTNKVVQQYRSGWEDEAASVVEDVRQNPVAGTTGIVLRRRLQLLMYNNMYRIMFDRRFENEEDPLFKKLKVVNSERSRLSQSFEYNYGDFIPVLKPFLRRYLKVCKDVKDRRFQLFKDYFVEHRKKLGSIRRTENEGLKCAMDHILDAQKKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPSIQNKLRDEIDKILGPKHQVTEQDTHKLPYLQAIIKETLRLRMSIPLLVPHMNLHDAKLANNPVHWKNPEEFRPERFLEEESKVEANGNDFRFLPFGVGRRSCPGIILALPIIGITLGRLVQNFELLPPPGESKIDTTEKGGQFSLHILKHSTIVLKPRSF 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01403 487 Gene3D Cytochrome P450 22 479 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car05g01403 487 PANTHER TRANS-CINNAMATE 4-MONOOXYGENASE 1 487 - -
Car05g01403 487 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 422 431 IPR017972 GO:0005506|GO:0016705
Car05g01403 487 PRINTS E-class P450 group I signature 381 405 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car05g01403 487 PRINTS E-class P450 group I signature 429 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car05g01403 487 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car05g01403 487 PRINTS E-class P450 group I signature 419 429 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car05g01403 487 PRINTS E-class P450 group I signature 181 199 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car05g01403 487 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car05g01403 487 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car05g01403 487 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car05g01403 487 SUPERFAMILY Cytochrome P450 34 485 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car05g01403 487 PRINTS P450 superfamily signature 420 429 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car05g01403 487 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car05g01403 487 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car05g01403 487 PANTHER TRANS-CINNAMATE 4-MONOOXYGENASE 1 487 - -
Car05g01403 487 Pfam Cytochrome P450 34 387 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car05g01403 487 Pfam Cytochrome P450 386 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01403 Car-Chr5 58131334 58135610 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01403 1 486 Monolignol Biosynthesis Gene Families AT2G30490 76.984 0.0 796
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01403 K00487 - pop:7498118 836.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01403 05 58131334 58135610 Car05g01403 05 58131334 58135610 ECH
Car05g01403 05 58131334 58135610 Car02g01448 02 41392703 41397355 PCT