Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01401 ATGGCAGACAACGTGGTTTTGTTGGATTTTTGGCCAAGCTCATATGGAATGAGAGTGAAAATCGCGCTAGAAGAGAAAGGAATCACATATGAGTGTAGACAAGAAGATTTTCAAGCTAAAAGCTCTCTGCTTTTGGAGATGAACCCGATTCACAAATTGATCCCAGTTTTAATTCATAATGGAAAACCGGTATGTGAATCGCTTAATGTCATTGAGTACATTGATGAGGTTTGGAATTACAAACCTTCTCTTTTGCCCTCTGACCCTTACAAGCGTTCTCAAGCGAGGTTTTGGGGCGATTACATTGACAAAAATGTATACAGCATTAGAAGGAAGGTGTGGATAGGAAAGGGTAAAGAACAAGAAGAGAGTAAAAAGAAGTTTATAGAATGCTTGAAGACTCTAGAACAAGAGCTTGGAGATAAGCCATATTTTGGTGGAGAGGAGTTTGGGTATGTTGATGTGGCTCTTATTCCCTTCACAAGTTGGTTTTACACTTATGAGATCTATGGGAAACTAAACATAGAGGAAGAGTGTCCTAAGCTTGTGACTTGGGCCAAGAGGTGTATGGAAAAGGAGAGTGTGGCAAAGTCACTCCCTCACCCTCACAAAATTTATGGTTTTGCAAAGCAATATAAACAAAGACATGGACTTGAATAG 660 0.397 MADNVVLLDFWPSSYGMRVKIALEEKGITYECRQEDFQAKSSLLLEMNPIHKLIPVLIHNGKPVCESLNVIEYIDEVWNYKPSLLPSDPYKRSQARFWGDYIDKNVYSIRRKVWIGKGKEQEESKKKFIECLKTLEQELGDKPYFGGEEFGYVDVALIPFTSWFYTYEIYGKLNIEEECPKLVTWAKRCMEKESVAKSLPHPHKIYGFAKQYKQRHGLE 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01401 219 SUPERFAMILY GST C-terminal domain-like 76 216 IPR036282 -
Car05g01401 219 Pfam Glutathione S-transferase, N-terminal domain 7 76 IPR004045 -
Car05g01401 219 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 208 IPR010987 -
Car05g01401 219 CDD GST_N_Tau 5 78 - -
Car05g01401 219 SUPERFAMILY Thioredoxin-like 4 106 IPR036249 -
Car05g01401 219 Gene3D - 88 219 - -
Car05g01401 219 SFLD Main.3: Omega- and Tau-like 2 216 IPR045073 -
Car05g01401 219 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Car05g01401 219 SFLD Glutathione Transferase (cytosolic) 2 216 IPR040079 -
Car05g01401 219 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 3 213 IPR045073 -
Car05g01401 219 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 3 213 - -
Car05g01401 219 CDD GST_C_Tau 89 212 IPR045074 GO:0004364|GO:0006749
Car05g01401 219 Gene3D Glutaredoxin 1 87 - -
Car05g01401 219 Pfam Glutathione S-transferase, C-terminal domain 122 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01401 Car-Chr5 58102119 58104652 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01401 1 219 Glutathione S-transferase Gene Family AT1G17180 63.927 7.31e-104 297
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01401 K00799 - gmx:100527221 385.956