Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01394 ATGGCAACAcatatgcaagatccaccttccaactcaaatccaaatcccaatGTTACAGCGTCAACGCCTTCTTCCAACGTCTTTATTCGCGGCGGCATTAACGGCCCTTCCACCACTCCCTTCGCCGGAGACGGCACCGGAGAATCTCACTCTCATCACCGGAGAGCGCACTCAGAAATCAGTTATCGTCTACCTGACGACATGATGGACCTTTCACCGTCGGATCCGTTAAACGGCGGATCTTCAACGGCGAGCCTGGAAGAGATCGGATCCGAAGACGACCTGTTCTTCACCTACATTGACGTGGAGAAGCTCGGAGGAGGTGTAAACGGTTCGAATCGTGGAGGAAATGGATCGGATCCGAGCGGTTATGGTAACGGTGCCGGAACAAGCGGAAACAACGACGGAGAGAAAAGTCCGAACGCTGCTACTACACCGAGAACGAGGCATAGACATAGTTGTTCCGTTGACGGTTCAACGTCGACGAGCATGTTTGGAGAGATCATGGATGCTAAAAAAGCTATGCCTCCTGATAAACTCGCTGAGCTTTGGACTATTGATCCAAAGCGTGCCAAGAGAATACTTGCGAATCGACAATCTGCAGCACGCTCGAAAGAAAGAAAAGCCCGCTATATACAAGAGCTTGAGCGCAAGGTTCAAACCCTTCAAACAGAAGCCACTACTCTTTCTGCTCAATTGACACTATACCAGAGGGACACAACTGGTTTGAGTACTGAAAATACCGAGCTTAAGCTTCGTCTGCAAGCCATGGAACAACAGGCACACCTTCGAGATGCTCTTAATGATGCATTGATGAAGGAAGTTGAGAGGCTAAAGATTGCTACCGGGGAGGCAATGAACCCCTCTGAATCTTATAATCTGGGAATGCACCAGATGCAATTTGCAGGGTCAAATTTCTTTTCAATGCCACAACATTCAGGTCCTTCTGGTCACCAGAACATACAATTTCCTCAATTTGGTCACTCCTCATCTAACATGCCAACTCATCAGCTGCAACAAACCAATTCTCATCAAATCTCAGAGATGTTACAAAATGACCAGCTCGGCCGTTTGCAGGGACTCGATATTAGTAGCAAAGGAACAACCCTCGTGAAGTCCGAAGGTCCCTCGATATCTGCAAGTGAGAGTAGCACTACATTTTGA 1164 0.4656 MATHMQDPPSNSNPNPNVTASTPSSNVFIRGGINGPSTTPFAGDGTGESHSHHRRAHSEISYRLPDDMMDLSPSDPLNGGSSTASLEEIGSEDDLFFTYIDVEKLGGGVNGSNRGGNGSDPSGYGNGAGTSGNNDGEKSPNAATTPRTRHRHSCSVDGSTSTSMFGEIMDAKKAMPPDKLAELWTIDPKRAKRILANRQSAARSKERKARYIQELERKVQTLQTEATTLSAQLTLYQRDTTGLSTENTELKLRLQAMEQQAHLRDALNDALMKEVERLKIATGEAMNPSESYNLGMHQMQFAGSNFFSMPQHSGPSGHQNIQFPQFGHSSSNMPTHQLQQTNSHQISEMLQNDQLGRLQGLDISSKGTTLVKSEGPSISASESSTTF 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01394 387 Pfam bZIP transcription factor 189 244 IPR004827 GO:0003700|GO:0006355
Car05g01394 387 Gene3D - 188 241 - -
Car05g01394 387 Coils Coil 205 232 - -
Car05g01394 387 MobiDBLite consensus disorder prediction 1 45 - -
Car05g01394 387 MobiDBLite consensus disorder prediction 112 161 - -
Car05g01394 387 PANTHER BZIP TRANSCRIPTION FACTOR 1 384 - -
Car05g01394 387 MobiDBLite consensus disorder prediction 1 85 - -
Car05g01394 387 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 1 384 - -
Car05g01394 387 MobiDBLite consensus disorder prediction 107 161 - -
Car05g01394 387 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 187 250 IPR004827 GO:0003700|GO:0006355
Car05g01394 387 MobiDBLite consensus disorder prediction 368 387 - -
Car05g01394 387 MobiDBLite consensus disorder prediction 309 343 - -
Car05g01394 387 MobiDBLite consensus disorder prediction 47 64 - -
Car05g01394 387 CDD bZIP_plant_RF2 190 239 IPR044759 GO:0003700|GO:0006355
Car05g01394 387 SUPERFAMILY Leucine zipper domain 189 240 IPR046347 GO:0003700|GO:0006355
Car05g01394 387 SMART brlzneu 185 249 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01394 Car-Chr5 58032312 58035303 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01394 5 387 bZIP Transcription Factor Family AT2G40620 49.639 8.72e-104 309
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Car05g01394 bZIP_1 6.7e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01394 - - gmx:100775607 573.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01394 05 58032312 58035303 Car05g01394 05 58032312 58035303 ECH
Car05g01394 05 58032312 58035303 Car02g01445 02 41358999 41361818 PCT