Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01373 atgaggaggtacattattgtgACTGATTTGGCGAAGCCATACGTAGAGAAATTGATTAATAGGGCATTGGCAGAATCAAGTTATATATGTTGCTTCACGTGCATTGCTAAGGATTTCGAAGAAGAAAAAGCTAGGTTGGTACCTGAAAGGAAAACTATTAAGGAACGTGTTGACGTGGCAACCAATAGAGGAGAATATATTGAAAGTAATGTTGTTTCTTGGGAAGAAGAAGCTGATAAGCTCATTCAAGAAGACACCAAAACAAAACAAAAATGTTGTTTTGGATTTTGTCCTCATTGTATATGGCGATATATAAGGGGAAAGGAACTAGCAAATAAAAAGGATCGTATTAAAGAATTAATGAAAACTGGAAAGGAATTTTCAATTGGACTCCCTGCTCGTCTTCCAGGTGTTGAAAGCAATCAACCTCAACTCTATATTTCTTTTAAAAGCAGAGAATCCATATACGATGAGCTTTTGGATGCACTTAAAGATGACAACAATTATATAATCGGGTTGCAAGGAATGGGGGGCACAGGAAAAACAACATTAGCCATAAAAGTGGGTAACGAACTTGAGCAATCCAAACAATTTACCAAAGCCATCATTACGACAGTGTCAAATTCTCCTGATATTAAAAAGATTCAAGATGATATTGCTGGACCCTTGGGATTGAAATTGAATGACGATAGTGAATCAGACCGACCCAAAAAACTATGGAAAAGATTGACTCAAGGTGAGAAGATTCTTCTAATATTGGATGATGTGTGGGGAGATCTCGATTTTAAGGAAATAGGTATTCCATATAGTGACAATAACAAAGGTTGCAGAGTTCTTGTAACCACACGCCAAATATCGGTATGCAACAGAATGGGATGCAATAAGACAATACAACTGGAGCTTTTAACTGAAGAAGATGCATGGAACATGTTCAAAAGGCATGCTGGTCTATGCAGCAATTCATCCAAAAGTTTGCTCGGTAAGGCTCATAAAATTGCAAATGAATGCAAAAGATTACCAATTGCAATTGCTGCTATTGCCAGTAGTTTGAAAGGAGAACAACGTCCGGAAGAGTGGGATGCCGCCTTAAAATCCTTGCAGAAACATATGTCCATGCGCGGTGGTGATGATGGTGATGAACTAGATAAAATTTATAAATGCTTGAAGTTTAGTTACGATAATATGAAGAATGAAAAGGCCAAGAGACTATTCCTGTTGTGTTCTGTATTTCAAGAAGATGAAAATATTCCTATAGAAAGGTTAACCAGATTTGGCATAGGAGCAGGAATTTTTGGTGAAGATTATGATAGCTACGAAGATGCACGAAGTCAAGTAGTTATATCCAAAAATAAACTGTTAGATTCTTGTTTATTATTGAAAGCCAATCAAGAAGAGAGTGTGAAAATGCACGACTTGGTTCGTGATGCTGCCCAAAGAATAGCAAAGAAAAAGATTCAAACAATAAATATTTCTAATAAAAATGAAAAGGCATTGGTTGAAAGGGAAAATAATATTAAATATTTGTTATGCCAAGGCAAGTTAATGGACGTTCTTTCTTGCAAGTTTGGTGGTTATGAGCTTGAAATTCTAATTGTCTACATGCATGAGGATGGAGGTTGGGACAATGTGAATGTAGAATTCCCAAATACATTTTTTGGAAATAATACAGGCCTTCGTGTTTTTCATATATTGTTTGATTTTAATTTTTATAAACCAACTTTACCATTCATACAATCAATCCAGTCGTTGAAGAATATTCGATCATTTCTTTTTGAGAATGTCAATTTGGGTGACATCTCTATTTTGGGAAACATGCATAGTCTTGAGACACTTGATTTGGTTAGTTGTAAAATTAATGAATTGCCACATGGAATTACAAAACTAGAGAAGCTAAGATTGTTGAATTTGGACTCTTGTGAAATTCTAAGGAATAATCCATTTGAAGTGATTAAAGGATGCTCATTACTTGAAGAGTTGTATTTCTTATACAGTTTTAATATTTTTTGCCAAGAAATAAGTTTTCCTAAATTGAAAATTTTTCATATCAAGGATAATTTTACATCAAGGCATTCACCATTAATTAAGTGTGTGTCTGTTATATATTTTGAAAGGGTTCTATCTGAATCAACCCTCAAGTACTGTATGCAAACAGCTGAGGTTCTTCAACTAAGAAGAATCGAAAAGGGATGGAGAAATCTCATGCCTGAGATTGTTCCTGTAGATCAAGGTATGAATAATTTAGTTGAGCTTCTTTTACATTGGATTTCACAATTACAATTCCTTATTGACACTAAGCTATGTGATTCTCAAGTACCAAATGTGTACTCCAAATTGGTTATACTAGATCTTTATAAATTAGAAAATTTGGAAGAATTGTGCAATGGTCATGTTTCCTTTGACTCTTTTGGGAGTTTAGAGAAGCTATCGATCAAGGCTTGTGAACATTTGCAAAGCTTATTTAAGTGCAATCTTAACCTTTGCAATCTAAAGAGCATTTTATTGGAGGAATGTCCGATGTTGATCTCCTTATTTCAACAGAAAAGTTCTCGTAGTCTAGTGTTGTTGGAGAAGTTGGAATTAATTGACTGCAAAAGACTTGAATACataataataaatgaaagaaaatgggaggaatcaagtgatgatgataatgataGCATGAGTCGTGGATCATTGTTTCCAAAATTGAAAGTTCTTTATATTGAAAAGTGTCCTAATTTTGAATTAATACTTCTATTTCTCTCTGCTCATGATCTTCCGGCACTAGAATCTATCACAATGCAAAGTTGTGATAAGTTGAAATACATATTTGGCCAAAATGTCAAACTTGATTCCCTAAATCAAATGAAGCTTGGTAGTTTACCAAATTTTATCGATATTTTCCCCCAAATTTTTTCGTCTATTAAGGAGCCATCTTCCATTTCTAGAGACACTTCCAAGTCACAAACACAATCACTTCCTATCAAAGGCAATATATTTTCATGGATAAGTACTGCATGTACTAAAATACCGCCAACTTCTGACGATGAACAGCAGGATTGCTTAATATCATCGGAATCAAGTTCATATTGCCTCAACTATAACATATGGGAACATGTTCAATGTTTTTCAAGACAATCACAAATCTTGTGCAATATTAAAGATATTCAACTGACTAATATTGCGAAGATAAAATCAGTATTTATCTTGTTTATTGTTCCAAGAATGTTGCTGGAAACATTGACAATTGAGAATTGTGATGAATTGAAGCACATCATAATAGACACTGAAGATCATGACAGTTGTAATAATAATTTGGGCAATGTCTTACCGAAATTGAAAAATCTCAATGTTAGAAATTGTGTGGAATTGGAATACATATTTGGACATTATGTTGATGATCATCAAAACCACATTGAGATTCACATTCATCTTCCAGCATTGGAATGTCTCGTGCTTCAGAATCTGCCAAGTTTAGCCGCCATGTGTTCCAAACAATATCACATAACATTTCCACCTTTGAAAGAACTTGAATTCCAAAAATGTGATGATGTTGCTTTCAAATCTATTGGCGATTTCTTAACTCATCATTCGATTACAAGATCTGTAGACCGTACAACCATGAAGGAGTTGAGTGGGAACGTGGAGTATTTTCAGAAATTGGAAATACTTGATTTAAGTGACTCCAAAATAGAATATATCTTTTGGCTCGATGAAATAGATGGACAAGAAATGAATACAGGGTTGACATATATTAGCTTATATAATATGTCTGGTATGACATGTCCTTTTGTGGGTCCCAAAAACTATATTTTCCTCAAAAGTCTTACACAGTTAGTTATAATGCATTGTAAAAAATTGGAAATTGTTTTCTCCACATCTGTATCAAGATGCCTACCACAACTGCAATATTTAACAATAAAAGAATGCAAAGAGTTGAAGCATATTATTGAAGATGATTTGGAGAATAAAAAGTCCTCAAAGTTTCCGTCTACAAACCCATGCTTCCCAAAGTTAGAAGTGCTTTATGTAGTAAACTGCAACAACTTGAAATGTATCTGTCCAAGCTCCATGTGTAAAGACTTTCCTAAATTATATCACATTGATGTTGAAGATTGCGTGCAATTGGAATACATAGTTGGACCCTACAGTGATGATCATCAAAACCACACAGAGATTCACATTCATTTTCTAGCATTGGAATATCTCTATCTTGTCAATCTGCCAAGTTTAGTAGCCATGTGTCCCAAACAATATGGCACAACATTTCCATGTTTGAAACTCCTTAAACTCAATAATTGCTCCAAGGTTGATATTAAATCTATTGGTGATTTCATAACTCGTCATTCGTTAACAAGATCTATGGACGGTGCATCCATGAAGGAATTGAGTGGGACCATGGAGCATTTTCTCAATGAAGTAAATGAACAGAAGATGAACATAAAGTTAGAAATTATTGAGTTGCATAGTCTGGCTTTGATGACGTCTCTTTTTTTGGGTCCCAAAAACTCTTTTGCTCTCCAAAACCTAACAAACTTATACATAGTGCAATGTGAAAAATTGGAAATAATTTTCTCTAATTCTATTTTAAGATGCCTACCACAATTGCAAAGTCTAATAATAGAAGAATGCAAAGAGTTGAAGCATATCATTGAAGATGATACGGAGAATCAAACGACGTCAAATTCCAATTCCTTGTGTTCAAGAACATGCTTCCCAAAGCTAGAAGCACTTGCTGTAGTAAAGTGCAACAAGTTGAAATCTGTCTTTCCAGTCTCAATATGTAAAGAGCTTCCTGAGTTAAAGGTTCTGATGATAAAAGAAGCAAATGAGCTAGAGGAAATATTCAAAAGTGAATGTGATAATCAGAAAGTGGAGGTTCCAAATCTGAAAATGGTAGCATTTGTTGACCTACCAAGCCTTTGCCAGAACCAAGGAATTCAGTTTCAGGCTGTAGAAAATCGTTTTGTACAGAAATGTCAAAACCTCTCTCTTACTTGTGATTCAACAACCCACAGTAAAATCAAAATCTTTCATATTTTCGATTCCAACTTAGATTATGAAACTATTACAATTTTGGAGAGTCTATTTGAACAATTACAAGAAGAGTATGAAGGCAGTGATACTGGTAGTGAAGGTCCAAGTACAAAAACCACTAAAGATTTTGAAGCTGAGATTGAAGTTGAAGCAGCATCAGAACAAAAGTTGACTTCTTCACAGGAGTTTATGAATGAACAATTAATGGATCAACCATGTTTGATGAACCAACAACATCCACTTGGAGAAATTGATACTACCGTAAAACCTTCTCAGGAACAAGATGTTGATGTCATAGACTCTGTGGAAACTACTAAGACTAATAATGATAAAGTTTCTGTAATTGATGATGCTGTCATAAAAGAAAGCTCAATCATTGAAGAACACTTTCCTAAGGATGATGCTACTACAGTTTCAGAATCTAAGCCCTCTCCTAGCAATAGTATTCCTTTGCCTCTTGCATATCAAACTCCTTCAATTCCTTCTGAAGGGAACCCTTCTCAAATAATGGAAGACTTGAGTTCTCCTTCTCTAGTCACGTGGGAGCTTGAGCAACTAGTCTCCAATAAGCATTTGAATTATGAGAACTTGTCTGTGTTGGCTGATTTCCTTGTTAAAAATCCTTCAGGACTATTAAGGGATACTTCACTAAGTAACAGATACAAGGGTTATGCCTACAACTGTTTAGCTGAGCTATTGAAATTCCTCCAGACTCAAAGTGTATTGGATGTGTTAGGCTCAAGCCACTCTAAATTTGTTGAGTTATTACAAGATGCACGCAGCTTTGGTTTTGATAAGGATTGGTTGGACGGTGTCGAGAGGCGCGCTTTGTTTCCTGAATTGCAAGTATCTCAAGATGCATTTCAAAAACTATTGGATTCTAAGCAACAGGTTACCAAAGAAGTTGAAGTTTTGCGTTTGAAGATAGACATTTTAAGTCAATGTGTGGAAGATCTTAACTATCAATTGACATCATCTGAAGCTGCTTTGGAGAATATCATTCAACAAGAAGCAACTTTAACTGCCCCTATCGGCTACTAG 6057 0.3464 MRRYIIVTDLAKPYVEKLINRALAESSYICCFTCIAKDFEEEKARLVPERKTIKERVDVATNRGEYIESNVVSWEEEADKLIQEDTKTKQKCCFGFCPHCIWRYIRGKELANKKDRIKELMKTGKEFSIGLPARLPGVESNQPQLYISFKSRESIYDELLDALKDDNNYIIGLQGMGGTGKTTLAIKVGNELEQSKQFTKAIITTVSNSPDIKKIQDDIAGPLGLKLNDDSESDRPKKLWKRLTQGEKILLILDDVWGDLDFKEIGIPYSDNNKGCRVLVTTRQISVCNRMGCNKTIQLELLTEEDAWNMFKRHAGLCSNSSKSLLGKAHKIANECKRLPIAIAAIASSLKGEQRPEEWDAALKSLQKHMSMRGGDDGDELDKIYKCLKFSYDNMKNEKAKRLFLLCSVFQEDENIPIERLTRFGIGAGIFGEDYDSYEDARSQVVISKNKLLDSCLLLKANQEESVKMHDLVRDAAQRIAKKKIQTINISNKNEKALVERENNIKYLLCQGKLMDVLSCKFGGYELEILIVYMHEDGGWDNVNVEFPNTFFGNNTGLRVFHILFDFNFYKPTLPFIQSIQSLKNIRSFLFENVNLGDISILGNMHSLETLDLVSCKINELPHGITKLEKLRLLNLDSCEILRNNPFEVIKGCSLLEELYFLYSFNIFCQEISFPKLKIFHIKDNFTSRHSPLIKCVSVIYFERVLSESTLKYCMQTAEVLQLRRIEKGWRNLMPEIVPVDQGMNNLVELLLHWISQLQFLIDTKLCDSQVPNVYSKLVILDLYKLENLEELCNGHVSFDSFGSLEKLSIKACEHLQSLFKCNLNLCNLKSILLEECPMLISLFQQKSSRSLVLLEKLELIDCKRLEYIIINERKWEESSDDDNDSMSRGSLFPKLKVLYIEKCPNFELILLFLSAHDLPALESITMQSCDKLKYIFGQNVKLDSLNQMKLGSLPNFIDIFPQIFSSIKEPSSISRDTSKSQTQSLPIKGNIFSWISTACTKIPPTSDDEQQDCLISSESSSYCLNYNIWEHVQCFSRQSQILCNIKDIQLTNIAKIKSVFILFIVPRMLLETLTIENCDELKHIIIDTEDHDSCNNNLGNVLPKLKNLNVRNCVELEYIFGHYVDDHQNHIEIHIHLPALECLVLQNLPSLAAMCSKQYHITFPPLKELEFQKCDDVAFKSIGDFLTHHSITRSVDRTTMKELSGNVEYFQKLEILDLSDSKIEYIFWLDEIDGQEMNTGLTYISLYNMSGMTCPFVGPKNYIFLKSLTQLVIMHCKKLEIVFSTSVSRCLPQLQYLTIKECKELKHIIEDDLENKKSSKFPSTNPCFPKLEVLYVVNCNNLKCICPSSMCKDFPKLYHIDVEDCVQLEYIVGPYSDDHQNHTEIHIHFLALEYLYLVNLPSLVAMCPKQYGTTFPCLKLLKLNNCSKVDIKSIGDFITRHSLTRSMDGASMKELSGTMEHFLNEVNEQKMNIKLEIIELHSLALMTSLFLGPKNSFALQNLTNLYIVQCEKLEIIFSNSILRCLPQLQSLIIEECKELKHIIEDDTENQTTSNSNSLCSRTCFPKLEALAVVKCNKLKSVFPVSICKELPELKVLMIKEANELEEIFKSECDNQKVEVPNLKMVAFVDLPSLCQNQGIQFQAVENRFVQKCQNLSLTCDSTTHSKIKIFHIFDSNLDYETITILESLFEQLQEEYEGSDTGSEGPSTKTTKDFEAEIEVEAASEQKLTSSQEFMNEQLMDQPCLMNQQHPLGEIDTTVKPSQEQDVDVIDSVETTKTNNDKVSVIDDAVIKESSIIEEHFPKDDATTVSESKPSPSNSIPLPLAYQTPSIPSEGNPSQIMEDLSSPSLVTWELEQLVSNKHLNYENLSVLADFLVKNPSGLLRDTSLSNRYKGYAYNCLAELLKFLQTQSVLDVLGSSHSKFVELLQDARSFGFDKDWLDGVERRALFPELQVSQDAFQKLLDSKQQVTKEVEVLRLKIDILSQCVEDLNYQLTSSEAALENIIQQEATLTAPIGY 2018
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01373 2018 CDD AAA 152 282 - -
Car05g01373 2018 SUPERFAMILY RNI-like 1389 1604 - -
Car05g01373 2018 Pfam NB-ARC domain 156 394 IPR002182 GO:0043531
Car05g01373 2018 Gene3D - 136 300 IPR027417 -
Car05g01373 2018 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 143 407 IPR027417 -
Car05g01373 2018 PRINTS Disease resistance protein signature 170 185 - -
Car05g01373 2018 PRINTS Disease resistance protein signature 243 257 - -
Car05g01373 2018 PRINTS Disease resistance protein signature 336 350 - -
Car05g01373 2018 PRINTS Disease resistance protein signature 626 642 - -
Car05g01373 2018 Gene3D - 301 396 IPR042197 -
Car05g01373 2018 PANTHER AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED 89 964 - -
Car05g01373 2018 PANTHER AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED 1411 1625 - -
Car05g01373 2018 PANTHER AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED 1205 1341 - -
Car05g01373 2018 SUPERFAMILY RNI-like 1206 1430 - -
Car05g01373 2018 PANTHER - 1205 1341 - -
Car05g01373 2018 PANTHER - 1411 1625 - -
Car05g01373 2018 PANTHER - 89 964 - -
Car05g01373 2018 SUPERFAMILY L domain-like 465 960 - -
Car05g01373 2018 Gene3D Ribonuclease Inhibitor 539 963 IPR032675 -
Car05g01373 2018 MobiDBLite consensus disorder prediction 1803 1823 - -
Car05g01373 2018 Gene3D Ribonuclease Inhibitor 1392 1625 IPR032675 -
Car05g01373 2018 Gene3D Ribonuclease Inhibitor 1162 1372 IPR032675 -
Car05g01373 2018 MobiDBLite consensus disorder prediction 1809 1823 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01373 Car-Chr5 57690549 57700601 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01373 152 677 WRKY Transcription Factor Family AT5G45050 22.898 5.27e-10 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01373 - - cam:101500233 3674.79