Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01370 ATGGAGAGTTTCATGCCTGATTTGGCGAAGTCATACGTAGAGAAATTGATTAAAGGGGCGTTGGTAGAATCAAGTTATATATGTTGCTTCACATGCATCGCTAAGGATTTCGAAGAAGAAAAGGCTAGGTTGGTATCAGAAAGCAAAACTATCAAGGAACGTGTTGAAGTGGCAACCAATAGAGGAGAAGATATTCAAAGTAATGTTGATTATTGGGAAAAAGAAGCTGATAAGCTCATTCAAGAAGACACCAAAACAAACCAAAAATGTTGTTTTGGATTTTGTCCTAATTGCATATGGCGATATATAAGGGGAAAGGAACTAGCAAATAAAAAGGATCGTATTAAAGAATTAATGAAAACTGGAAAGGAACTTTCAATTGGACTCCCTGCTCGTCTTCCAGGTGTTGAAAGCAATCAACCTCAATTCTATATTTCTTTTAAAAGCAGAGAATCCATATACAATGAGCTTTTGGATGCACTGAAAGATGACAACAATTATATAATCGGGTTGCAAGGAATGGGGGGCACAGGAAAAACTACATTAGCCATAAAAGTGGGTAACGAACTTGAGCAATCCAAACAATTTACTAAAGCCATCATTACGACAGTGTCAAATTCTCCTGATATTAAAAAGATTCAAGATGATATTGCTGGACCCTTGGGATTGAATTTGAATGACGATAGTGAATCAGACCGACCCAAAAAACTATGGAAAAGATTGACTCAAGGTGAGAAGATTCTTCTAATATTGGATGATGTGTGGGGAGATCTCGATTTTAAGGAAATAGGGATTCCATATAATGACAATAACAAAGGTTGCAGAGTTCTTGTAACCACACGCCAAATATCGGTATGCAACAGAATGGGATGCAATAAGACGATACAACTGGAGCTTTTATCTGAAGAAGATGCATGGAACATGTTCAAAAGGCATGCTGGTCTATGCAGCAATTCATCCAAAAGTTTGCTCGGTAAGGCTCATAAAATTGCAAATGAATGCAAAAGATTACCAATTGCAATTGCTGCTATTGCCAGTAGTTTGAAAGGAGAACAACGTCCGGAAGAGTGGGATGCCGCCTTAAAATCCTTGCAGAAACATATGTCCATGCGCGGTGGTGATGATGGTGATGAACTAGATAAAATTTATAAATGCTTGAAGTTTAGTTACGATAATATGAAGAATGAAAAGGCCAAGAGACTATTCCTGTTGTGTTCTGTATTTCAAGAAGATGAAAATATTCCTATAGAAAGGTTAACCAGATTTGGCATAGGAGCAGGAATTTTTGGTGAAGATTATGATAGCTACGAAGATGCACGAAGTCAAGTAGTTATATCCAAAAATAAACTGTTAGATTCTTGTTTATTATTGAAAGCCAATCAAGAAGAGAGTGTGAAAATGCACGACTTGGTTCGTGATGCTGCCCAAAGAATAGCAAAGAAAAAGATTCAAACAATAAATATTTCTAATAAAAATGAAAAGGCATTGGTTGAAAGGGAAAATAATATTAAATATTTGTTATGCCAAGGCAAGTTAATGGACGTTCTTTCTTGCAAGTTTGGTGGTTATGAGCTTGAAATTCTAATTGTCTACATGCATGAGGATGGAGGTTGGGACAATGTGAATGTAGAATTCCCAAATACATTTTTTGGAAATAATACAGGCCTTCGTGTTTTTCATATATTGTTTGATTTTAATTTTTATAAACCAACTTTACCATTCATACAATCAATCCAGTCGTTGAAGAATATTCGATCATTTCTTTTTGAGAATGTCAATTTGGGTGACATCTCTATTTTGGGAAACATGCATAGTCTTGAGACACTTGATTTGGTTAGTTGTAAAATTAATGAATTGCCACATGGAATTACAAAACTAGAGAAGCTAAGATTGTTGAATTTGGACTCTTGTGAAATTCTAAGGAATAATCCATTTGAAGTGATTAAAGGATGCTCATTACTTGAAGAGTTGTATTTCTTATACAGTTTTAATATTTTTTGCCAAGAAATAAGTTTTCCTAAATTGAAAATTTTTCATATCAAGGATAATTTTACATCAAGGCATTCACCATTAATTAAGTGTGTGTCTGTTATATATTTTGAAAGGGTTCTATCTGAATCAACCCTCAAGTACTGTATGCAAACAGCTGAGGTTCTTCAACTAAGAAGAATCGAAAAGGGATGGAGAAATCTCATGCCTGAGATTGTTCCTGTAGATCAAGGTATGAATAATTTAGTTGAGCTTCTTTTACATTGGATTTCACAATTACAATTCCTTATTGACACTAAGCTATGTGATTCTCAAGTACCAAATGTGTACTCCAAATTGGTTATACTAGATCTTTATAAATTAGAAAATTTGGAAGAATTGTGCAATGGTCATGTTTCCTTTGACTCTTTTGGGAGTTTAGAGAAGCTATCGATCAAGGCTTGTGAACATTTGCAAAGCTTATTTAAGTGCAATCTTAACCTTTGCAATCTAAAGAGCATTTTATTGGAGGAATGTCCGATGTTGATCTCCTTATTTCAACAGAAAAGTTCTCGTAGTCTAGTGTTGTTGGAGAAGTTGGAATTAATTGACTGCAAAAGACTTGAATACataataataaatgaaagaaaatgggaggaatcaagtgatgatgataatgataGCATGAGTCGTGGATCATTGTTTCCAAAATTGAAAGTTCTTTATATTGAAAAGTGTCCTAATTTTGAATTAATACTTCCATTTCTCTCTGCTCATGATCTTCCGGCACTAGAATCTATCACAATGCAAAGTTGTGATAAGTTGAAATACATATTTGGCCAAAATGTCAAACTTGATTCCCTAAATCAAATGAAGCTTGGTAGTTTACCAAATTTTATCGATATTTTCCCCCAAATTTTTTCGTCTATTAAGGAGCCATCTTCCATTTCTAGAGACACTTCCAAGTCACAAACACAATCACTTCCTATCAAAGGCAATATATTTTCATGGATAAGTACTGCATGTACTAAAATACCGCCAACTTCTGACGATGAACAGCAGGATTGCTTAATATCATCGGAATCAAGTTCATATTGCCTCAACTATAACATATGGGAACATGTTCAATGTTTTTCAAGACAATCACAAATCTTGTGCAATATTAAAGATATTCAACTGACTAATATTGCGAAGATAAAATCAGTATTTATCTTGTTTATTGTTCCAAGAATGTTGCTGGAAACATTGACAATTGAGAATTGTGATGAATTGAAGCACATCATAATAGACACTGAAGATCATGACAGTTGTAATAATAATTTGGGCAATGTCTTACCGAAATTGAAAAATCTCAATGTTAGAAATTGTGTGGAATTGGAATACATATTTGGACATTATGAATTGAGTGGGAAGATGGATCATGTAAATGAAAAGCAGATGAACATAAAGTTAGAAAATATTAAGTTGCATACTCTGGCTTTGATGACGTCTCTTTTTTTGGGTCCCAAAAACTCTTTTGCTCTCCAAAACCTAAGAAACATAAATATAGTGCAATGTGAAAAATTGGAAATAATTTTTTCTAATTCTATTTTAAGATGCCTACCACAATTGCAAAGTCTAATAATAGAAGAATGCAAAGAGTTGAAGCATATCATTGAAGATGATACGGAGAATCAAAAGACGTCAAATTCCAATTCCTTGTGTTCAAGAACATGCTTTCCAAAGCTAGAAGCACTTGCTGTAGTAAAGTGCAACAAGTTGAAATCTGTCTTTCCAGTCTCAATATGTAAAGAGCTTCCTGAGTTAAAGGTTCTGATGATAAAAGAAGCAAATGAGCTAGAGGAAATATTCAAAAGTGAATGTGATAATCAGAAAGTGGAGGTTCCAAATCTGAAAATTGTAGCATTTGTTAACCTACCAAGCCTTTGCCAGAACCAAGGAATTCAATTTCAGGCTGTAGAGAATCGTTTTGTACAGAACTGTCAAAACCTCTCTCTCACTTGTGATTCAACAACCGACAGTAAAATCAATATCTTCCATATTTCCTATTCCAACTTAGATTATGAAACTTGTTTAATTTTGGAGAGTCTATTTGCACAATTACAAGAAGAGTATGAAGGCAGTGATACTGGTAGTGAAGGTCCAAGTACAAAAACCACTAAAGATTTTGCAGCTGAGATTGAAGTTGAAGCAGCATCAGAACACAAGCTGACTTTTTCACAGGAGTTGATGAATGAACAATTAATGGATCCACTTGGAGAAATTGATAATACCGTGAAACCTTCTCAGTTTTTGAAAGAAATAGAGGACAGTTCTACATCCGAAAAATGTGTAGCAGCAACTTTGTCCACCATTTCAGAAACAAAGAATGACTCACCTATACAATTAGTTGCTTCTAAACAAAAGGATACCGAGATAAGTGTTGAAGAAGGAACTACATTAACACCCTCAACTCATTTAATATTAGAACAAGATGTTGATGTCATAGACTCTGTGGAAACTACTAAGACTAATAATGATAAAGTTTCTGTAATTGATGATGCTGTCATGAAAGTAAGCTCCATCATTGAGAAACACTTTCCTAAGGATGATGTTACTACAGTTTCAGAATCTAAGCCCTCTCCTAGCAATAGTATTCCTTTGTCTCTTGCATTTCAAACTCCTTCTGAAGGGAACCCTTCTCAAATAGTGCAAGACTTGAGTTCTACTTCTCTAGTCACTTGGGAGCTTGAGCAACTAGTCTCCAATAAGCATTTGAATTATGAGAACTTGTCTGTGTTGACTGATTTCCTTGTAAAGCATCCTTCAGTTCTTTTAAGAGACAGTTCAGTGAGTAACAGATACAAGGGTTATGCCTACAACTGTCTAGCTGAGCTATTAAAATTCCTCCAAACACATAGTGTGTTGGATGTGTTAGGCTCAAGCCACTCTGAATTTGTTGAGTTATTACAAGATATGCGCAGATTTGCCTTTGATAAGGATTGGTTGGATGATGTTGAAAAGCGTGCTTTGTTTCCTAATTTACAATTCTCTCAAGATGCATTGCAAAAACTATTGGATTCCCAACAACGTGTCACTAAGGAAGTTGAAGAGATACGTTTGAAGATAAACATTTTTACTCAACATGTGGGAGATCTTAAGAAACAATTGGCATCTTATGAAGCATTTTTGGAGACTATCATGCAAGAGAAGGCAAAAGTTTTAGAAACCAAGGCTGCTTTAAGTTCACCTATTGGCTATTAG 5211 0.3452 MESFMPDLAKSYVEKLIKGALVESSYICCFTCIAKDFEEEKARLVSESKTIKERVEVATNRGEDIQSNVDYWEKEADKLIQEDTKTNQKCCFGFCPNCIWRYIRGKELANKKDRIKELMKTGKELSIGLPARLPGVESNQPQFYISFKSRESIYNELLDALKDDNNYIIGLQGMGGTGKTTLAIKVGNELEQSKQFTKAIITTVSNSPDIKKIQDDIAGPLGLNLNDDSESDRPKKLWKRLTQGEKILLILDDVWGDLDFKEIGIPYNDNNKGCRVLVTTRQISVCNRMGCNKTIQLELLSEEDAWNMFKRHAGLCSNSSKSLLGKAHKIANECKRLPIAIAAIASSLKGEQRPEEWDAALKSLQKHMSMRGGDDGDELDKIYKCLKFSYDNMKNEKAKRLFLLCSVFQEDENIPIERLTRFGIGAGIFGEDYDSYEDARSQVVISKNKLLDSCLLLKANQEESVKMHDLVRDAAQRIAKKKIQTINISNKNEKALVERENNIKYLLCQGKLMDVLSCKFGGYELEILIVYMHEDGGWDNVNVEFPNTFFGNNTGLRVFHILFDFNFYKPTLPFIQSIQSLKNIRSFLFENVNLGDISILGNMHSLETLDLVSCKINELPHGITKLEKLRLLNLDSCEILRNNPFEVIKGCSLLEELYFLYSFNIFCQEISFPKLKIFHIKDNFTSRHSPLIKCVSVIYFERVLSESTLKYCMQTAEVLQLRRIEKGWRNLMPEIVPVDQGMNNLVELLLHWISQLQFLIDTKLCDSQVPNVYSKLVILDLYKLENLEELCNGHVSFDSFGSLEKLSIKACEHLQSLFKCNLNLCNLKSILLEECPMLISLFQQKSSRSLVLLEKLELIDCKRLEYIIINERKWEESSDDDNDSMSRGSLFPKLKVLYIEKCPNFELILPFLSAHDLPALESITMQSCDKLKYIFGQNVKLDSLNQMKLGSLPNFIDIFPQIFSSIKEPSSISRDTSKSQTQSLPIKGNIFSWISTACTKIPPTSDDEQQDCLISSESSSYCLNYNIWEHVQCFSRQSQILCNIKDIQLTNIAKIKSVFILFIVPRMLLETLTIENCDELKHIIIDTEDHDSCNNNLGNVLPKLKNLNVRNCVELEYIFGHYELSGKMDHVNEKQMNIKLENIKLHTLALMTSLFLGPKNSFALQNLRNINIVQCEKLEIIFSNSILRCLPQLQSLIIEECKELKHIIEDDTENQKTSNSNSLCSRTCFPKLEALAVVKCNKLKSVFPVSICKELPELKVLMIKEANELEEIFKSECDNQKVEVPNLKIVAFVNLPSLCQNQGIQFQAVENRFVQNCQNLSLTCDSTTDSKINIFHISYSNLDYETCLILESLFAQLQEEYEGSDTGSEGPSTKTTKDFAAEIEVEAASEHKLTFSQELMNEQLMDPLGEIDNTVKPSQFLKEIEDSSTSEKCVAATLSTISETKNDSPIQLVASKQKDTEISVEEGTTLTPSTHLILEQDVDVIDSVETTKTNNDKVSVIDDAVMKVSSIIEKHFPKDDVTTVSESKPSPSNSIPLSLAFQTPSEGNPSQIVQDLSSTSLVTWELEQLVSNKHLNYENLSVLTDFLVKHPSVLLRDSSVSNRYKGYAYNCLAELLKFLQTHSVLDVLGSSHSEFVELLQDMRRFAFDKDWLDDVEKRALFPNLQFSQDALQKLLDSQQRVTKEVEEIRLKINIFTQHVGDLKKQLASYEAFLETIMQEKAKVLETKAALSSPIGY 1736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01370 1736 Gene3D Ribonuclease Inhibitor 1073 1284 IPR032675 -
Car05g01370 1736 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 141 405 IPR027417 -
Car05g01370 1736 Coils Coil 1671 1691 - -
Car05g01370 1736 Gene3D - 299 394 IPR042197 -
Car05g01370 1736 Gene3D Ribonuclease Inhibitor 538 996 IPR032675 -
Car05g01370 1736 CDD AAA 150 280 - -
Car05g01370 1736 SUPERFAMILY RNI-like 1145 1270 - -
Car05g01370 1736 Gene3D - 135 298 IPR027417 -
Car05g01370 1736 PANTHER AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED 88 961 - -
Car05g01370 1736 Pfam NB-ARC domain 153 392 IPR002182 GO:0043531
Car05g01370 1736 SUPERFAMILY L domain-like 463 958 - -
Car05g01370 1736 Coils Coil 34 54 - -
Car05g01370 1736 PRINTS Disease resistance protein signature 168 183 - -
Car05g01370 1736 PRINTS Disease resistance protein signature 241 255 - -
Car05g01370 1736 PRINTS Disease resistance protein signature 334 348 - -
Car05g01370 1736 PRINTS Disease resistance protein signature 624 640 - -
Car05g01370 1736 PANTHER - 88 961 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01370 Car-Chr5 57626043 57634553 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01370 150 675 WRKY Transcription Factor Family AT5G45050 22.898 2.90e-10 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01370 - - cam:101500233 2261.88