Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01368 atgtattattctaataataGAAAGGGCAAAAAAGAGGATGGTAGAAAGGAGCATAGTTACATGGAAACTGATCCAACTGGTCGATATGGTCGGGTTGGAGATATTCTTGGAAAAGGGGCAATGAAAACAGTGTATAAAGCAATTGATGAGGTCCTTGGAATAGAGGTAGCGTGGAACCAAGTCAAACTCAATGAGGCACTTCGTACACCAGAGGATTTGGAGAGACTTTATTTAGAGGTTCATCTTCTCAGTACCCTCAAACACCAATCCATCATGCAATTCTATACCTCTTGGATTGATGTTGACAACAGGACCTTCAACTTCATTACAGAAATGTTCACTTCTGGGACACTCAGAGAATACAGGAAGACATATAAGTATGTAGGCATGCAAGCAATAAAGAGTTGGGCTCGCCAAATCTTACAGGGTCTTGTTTATCTGCATGAACATGATCCTCCAGTAATTCATAGGGACCTCAAATGTGACAACATATTTGTCAATGGACATCTTGGACAAGTGAAAATTGGTGACCTTGGTCTAGCGGCAATTCTACGTGGTTCACAGCCAGCTCACAGCGTTATCGGAACCCCAGAGTTCATGGCACCGGAATTGTATGAAGAAGAATACAATGAACTTGTTGATGTGTACTCATTTGGCATGTGTGTTTTGGAAATTATTACATCTGATTATCCATATAGTGAGTGTACTAATCCGGCGCAGATATACAAGAAAGTGACATCGGGTAAGCTACCGGCAGCATTTTTCCGGATTGAAGATGCAGAAGCACAAAAGTTTATTGGAAAATGCCTAGTGAATGCAGCAAAGAGACCATCGGCAAAGGAACTGTTGAAGGATCCATTTCTTGTGTGCGATGATGCATCATCGATAACAAAGATTGTGATGCAGGATCCATTTTTAAATTACACTGAGATGGATAAACTTCAATTGAAGAGTGATTCACCTAGGACTTCAATGTCAATAACCGGGAAGCTGAATCCTGAAGATGATTCTATCTTTCTCAAAGTGCAAATTTCTGATAAGGATGGTTATGCTAGGAATGTATATTTTCCCTTTGACATTTTCAATGACACTCCAATTGATGTTGCAATGGAGATGGTGAAAGAGTTGGACATCACAGATTGGGAGCCTTCTGAAATTGCTAATATGATTGAAGGAGAGATATCCGTCCTGCTGCCCGATAGAAGAAATAGCAACCATCCACACACCTGTCATTCATTCAGTTATCATGATGATGAGAATGATGAAGGTCCTCATCAATATCATCACTCTGTCTCTTCTTGTTCATCGTCGCAAGAATCATTATCTAGTGCAGTCAATAGAGCTGATGACGTATCAAATGGATATCGTTTGCTCCATGACGATATGTGTGATGATGCCAGTTCACGATGCTCTTCACACGGGACATACTCCGACTTGAATTTTTGCTCTGTGGACGACCAGGATCACAATGTGGCTTCAACAAGAAAAGATAAACATCCCATCATGAATCACAAGTTTACAATGTTTTCACATGGTGAAGACCAAATCACTTTGAATCAGTGCAAAGTTTTAGCTGGACCACAAGCACCTTCTACAAGTGAAAGTAAGAAGATGACAGACAATCGTATATTAACGAGGAACAAGTCACTAATTGATATGAGGAGCCAATTACTACACCGATCTCTGGTCGAGGAGGTAAACAAAAGACGGTTATTCAAGACAGTTGGAGCTGTGGAAAGTATTGGATTTCAAACTCCTTATGAGATTACAAGCAAAAAGTCACAGCCTGTATGTGGTAATTTAGATGTCAGCTCTTCAGGAAAGGTAGAGAAGAAAACTTGA 1842 0.4012 MYYSNNRKGKKEDGRKEHSYMETDPTGRYGRVGDILGKGAMKTVYKAIDEVLGIEVAWNQVKLNEALRTPEDLERLYLEVHLLSTLKHQSIMQFYTSWIDVDNRTFNFITEMFTSGTLREYRKTYKYVGMQAIKSWARQILQGLVYLHEHDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSQPAHSVIGTPEFMAPELYEEEYNELVDVYSFGMCVLEIITSDYPYSECTNPAQIYKKVTSGKLPAAFFRIEDAEAQKFIGKCLVNAAKRPSAKELLKDPFLVCDDASSITKIVMQDPFLNYTEMDKLQLKSDSPRTSMSITGKLNPEDDSIFLKVQISDKDGYARNVYFPFDIFNDTPIDVAMEMVKELDITDWEPSEIANMIEGEISVLLPDRRNSNHPHTCHSFSYHDDENDEGPHQYHHSVSSCSSSQESLSSAVNRADDVSNGYRLLHDDMCDDASSRCSSHGTYSDLNFCSVDDQDHNVASTRKDKHPIMNHKFTMFSHGEDQITLNQCKVLAGPQAPSTSESKKMTDNRILTRNKSLIDMRSQLLHRSLVEEVNKRRLFKTVGAVESIGFQTPYEITSKKSQPVCGNLDVSSSGKVEKKT 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01368 613 MobiDBLite consensus disorder prediction 1 25 - -
Car05g01368 613 ProSitePatterns Serine/Threonine protein kinases active-site signature. 154 166 IPR008271 GO:0004672|GO:0006468
Car05g01368 613 CDD STKc_WNK 28 288 - -
Car05g01368 613 Gene3D Phosphorylase Kinase; domain 1 14 111 - -
Car05g01368 613 SMART serkin_6 30 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g01368 613 ProSiteProfiles Protein kinase domain profile. 30 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g01368 613 SUPERFAMILY Protein kinase-like (PK-like) 31 326 IPR011009 -
Car05g01368 613 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 26 598 - -
Car05g01368 613 Gene3D Transferase(Phosphotransferase) domain 1 113 294 - -
Car05g01368 613 Pfam Protein kinase domain 34 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g01368 613 MobiDBLite consensus disorder prediction 1 24 - -
Car05g01368 613 MobiDBLite consensus disorder prediction 594 613 - -
Car05g01368 613 MobiDBLite consensus disorder prediction 414 434 - -
Car05g01368 613 PANTHER WNK KINASE 26 598 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01368 Car-Chr5 57593961 57597749 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01368 20 592 MAP Kinase Kinase Kinase AT5G58350 58.204 0.0 643
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Car05g01368 Pkinase 4.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01368 K08867 - gmx:100778102 931.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01368 05 57593961 57597749 Car05g01368 05 57593961 57597749 ECH
Car05g01368 05 57593961 57597749 Car02g01440 02 41281362 41285803 PCT