Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01366 ATGCCGGAGATCGAACAAGCGACGGCGGCGGAAGTAACAGCCTTATTCGGAAAATATGAATTGGGAAGAGTCGTTGGTTGCGGCGCGTTCGCGAAAGTGTACTACGCGCGCAACACACAAACAGGACAAAGCGTAGCGGTGAAAATAATCAACAAAAAGAAACTCTCCGGAACAGGTCTCGCCGGAAACGTGAAACGCGAAATCTCAATTATGAGTCGTCTTCACCACCCTCATATCGTGTGTCTCCACGAAGTTCTCGCTACCAAGACGAAAATCTATTTTATAATGGATTTCGTTCGTGGTGGAGAACTCTTCGCTAAGATCGCAAAGGGTCGGTTCAGCGAAGATCTCAGCCGTAAATATTTTCATCAATTAATCTCAGCCGTTGGATATTGTCACTCGCGTGGCGTTTTTCATCGTGATCTTAAACCGGAGAATCTTTTGTTGGATGAAAATGGAAATTTAAAAGTTTCGGATTTCGGTTTAAGTGCGGTTAGAGATCAGATCCGACCCGATGGGTTGCTTCATACACTTTGTGGGACCCCTGCTTACGTGGCACCGGAGATTCTAGGTAAGCGAGGCTACGATGGAGCTAAGGTTGATGTTTGGTCATGCGGCGTCGTTTTGTTTGTTCTTGCGGCTGGTTACCTTCCATTCAACGACCAGAATTTAATGGTTATGTATCGGAAAATCTACAAAGGGGAATTCCGGTGTCCACGTTGGATGTCACCGGATCTCCGGCGATTTTTGTCGAAGTTACTTGATACAAACCCGGAAACCCGAATCACTGTCGATGGAATGACCCGAGATCCGTGGTTTAAGAAAGGGTACAAGGAGATAAAGTTTCATGAAGAAGATTATGGATCCGGGTCAGGGAGCGGGGTTGGATTCGGGTGTAAGGGTGATGGGTCGGAGGTGTTGGATTTGAACGCGTTTGATATTATATCTTATTCCTCGGGTTTGGATTTATCCGGGTTATTCGGGGAATTTGATGGGGTGGAGCGATTTGTTTTAAGGGAGTCGCCGGAGAGGATATTAGAGGTGGCGGAGGAAGTGGGAACGGCGGAGGGAATGGCGTTAAGGTGGAAGAAGGAATGTGGGGTGGAGTTGGAAGGTTTAAATGGTAATTTTGGAATTGAGATTGAGGTTTACCGGTTAACGGCTGAGATGGCGATGGTTGAAGTTAGGAGAAGAGGAAGCGATGTTGCGGCGTTTAGTAATTTGTGGGATGAGAAGCTTAAGCCTCAGTTGTTGTTAGGTGTTGCAACCACTTCGCATGAACATGAACATCAACCGCAGTTGCCGGTTGCCGGTGATTGA 1320 0.4705 MPEIEQATAAEVTALFGKYELGRVVGCGAFAKVYYARNTQTGQSVAVKIINKKKLSGTGLAGNVKREISIMSRLHHPHIVCLHEVLATKTKIYFIMDFVRGGELFAKIAKGRFSEDLSRKYFHQLISAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVRDQIRPDGLLHTLCGTPAYVAPEILGKRGYDGAKVDVWSCGVVLFVLAAGYLPFNDQNLMVMYRKIYKGEFRCPRWMSPDLRRFLSKLLDTNPETRITVDGMTRDPWFKKGYKEIKFHEEDYGSGSGSGVGFGCKGDGSEVLDLNAFDIISYSSGLDLSGLFGEFDGVERFVLRESPERILEVAEEVGTAEGMALRWKKECGVELEGLNGNFGIEIEVYRLTAEMAMVEVRRRGSDVAAFSNLWDEKLKPQLLLGVATTSHEHEHQPQLPVAGD 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01366 439 ProSiteProfiles NAF domain profile. 304 328 IPR018451 GO:0007165
Car05g01366 439 SMART serkin_6 19 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g01366 439 ProSitePatterns Protein kinases ATP-binding region signature. 25 48 IPR017441 GO:0005524
Car05g01366 439 PANTHER - 1 429 - -
Car05g01366 439 Gene3D Kinase associated domain 1, KA1 305 420 - -
Car05g01366 439 CDD CIPK_C 310 417 - -
Car05g01366 439 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 1 429 - -
Car05g01366 439 Pfam Protein kinase domain 19 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g01366 439 ProSiteProfiles Protein kinase domain profile. 19 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g01366 439 Pfam NAF domain 309 360 IPR004041 GO:0007165
Car05g01366 439 ProSitePatterns Serine/Threonine protein kinases active-site signature. 137 149 IPR008271 GO:0004672|GO:0006468
Car05g01366 439 SUPERFAMILY Protein kinase-like (PK-like) 16 281 IPR011009 -
Car05g01366 439 Gene3D Transferase(Phosphotransferase) domain 1 9 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01366 Car-Chr5 57582074 57584066 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01366 1 425 CBL-interacting serine-threonine protein kinases AT2G30360 62.844 0.0 539
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Car05g01366 Pkinase 3.9e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01366 - K12761 gmx:100799169 704.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01366 05 57582074 57584066 Car05g01366 05 57582074 57584066 ECH
Car05g01366 05 57582074 57584066 Car02g01435 02 41204550 41206858 PCT