Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01358 ATGTCAGGACCTGTACCTTCTGGGAATGGATCTTTTAAGATGAAAGCAATCAATGCCTCAAGCATTCTCAGGAATTCGTTGACAAGAAAGGGTAGGCGAAGTAGCAAGGTGATGTCCGTCGAAATTGAGGATGTTCACGATGCTGAGGAGTTGAAAGCTGTTGAAGAGTTTCGTCAAGTGCTTATATCGGACAAACTTCTCCCTGAAAAACATGACGACTATCATATGATGCTTAGGCTGAAACGTTATAGTATAAACTATGATATGCCTGACGGTGCAGACACATACTTGCACAGGGTTGGCCGGGTTGGAAGGTTTGGCACCAAAGGTCTTGCAATTACATTTGTTTCATGTTCAACTGATGTGTGGATGTTCTCAACAATGTATGACAATTGA 396 0.4242 MSGPVPSGNGSFKMKAINASSILRNSLTRKGRRSSKVMSVEIEDVHDAEELKAVEEFRQVLISDKLLPEKHDDYHMMLRLKRYSINYDMPDGADTYLHRVGRVGRFGTKGLAITFVSCSTDVWMFSTMYDN 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01358 131 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 83 124 IPR027417 -
Car05g01358 131 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 10 81 - -
Car05g01358 131 PANTHER PHOSPHATIDYLINOSITOL/PHOSPHATIDYLCHOLINE TRANSFER PROTEIN SFH10-RELATED 10 81 - -
Car05g01358 131 Gene3D - 17 131 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01358 Car-Chr5 57524850 57526590 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01358 85 121 Eukaryotic Initiation Factors Gene Family AT5G11170 83.784 8.42e-17 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01358 - - gmx:100796901 124.405