Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01357 ATGTCTCAACATCCTCCTTCTCTATATTTATCATCAATATTTGTTGCATTGGCTTTGTTATTCCTTCTTATAGGAACCTCTTCGGCTCAACTCGATGAAAACTTCTATTGTAAGAAATGTCCCAATGTTTTTGACACGGTAGAAACTGTTGTTAAATCTGCGGTGTCAAaagaacaacgcataggagcatctctccttcgtctctttttccatgactgctttgttgatcttggaggacctttttggaatgtaaaagttggaagaagagattcaaggacagcaaatttcattgctgctaacactggtgtgcttccatctccagcatctaacctaactaagcttatctcaacgtttaaagctcaaggactttctgttaaggacatggttgctttatctgGAGCTCACACAATTGGGGAAGCAAGGTGTACATCTTTCAGAAATCACATATACAATGAAAACAACATTGACAGTACATTTGCAAAGATAAGGCAAAGGAAATGTCCAAGTACTGTTGGCACAGGAGACAACAATCTAGCAAATCTAGACTTACAAACACCAACTCATTTTGACAACAACTACTATAAGAATCTCATCATCAAAAAGGGGCTACTTCATTCTGATCAAGAGCTCTTCAATGGTGGGTCCACTGATTCACTTGTTCAAACTTATACTCAAAATGAGAAAGCCTTTGATTCAGACTTTGTAGCTGCAATGATTAAGATGGGAAACAATAAACCCTTAACTGGGGGACAAGGGGAGATTAGAAAGAATTGCAGGAGATTGAATTAG 789 0.2662 MSQHPPSLYLSSIFVALALLFLLIGTSSAQLDENFYCKKCPNVFDTVETVVKSAVSKEQRIGASLLRLFFHDCFVDLGGPFWNVKVGRRDSRTANFIAANTGVLPSPASNLTKLISTFKAQGLSVKDMVALSGAHTIGEARCTSFRNHIYNENNIDSTFAKIRQRKCPSTVGTGDNNLANLDLQTPTHFDNNYYKNLIIKKGLLHSDQELFNGGSTDSLVQTYTQNEKAFDSDFVAAMIKMGNNKPLTGGQGEIRKNCRRLN 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01357 262 ProSiteProfiles Plant heme peroxidase family profile. 21 262 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car05g01357 262 ProSitePatterns Peroxidases proximal heme-ligand signature. 127 137 IPR019793 -
Car05g01357 262 PANTHER PEROXIDASE 76 260 - -
Car05g01357 262 PANTHER PEROXIDASE 9 76 - -
Car05g01357 262 Gene3D - 77 262 - -
Car05g01357 262 Gene3D - 30 76 - -
Car05g01357 262 SUPERFAMILY Heme-dependent peroxidases 30 262 IPR010255 GO:0004601|GO:0006979|GO:0020037
Car05g01357 262 CDD secretory_peroxidase 30 260 IPR033905 GO:0004601|GO:0042744
Car05g01357 262 PRINTS Plant peroxidase signature 40 59 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car05g01357 262 PRINTS Plant peroxidase signature 64 84 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car05g01357 262 PRINTS Plant peroxidase signature 122 132 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car05g01357 262 PANTHER PEROXIDASE 72-RELATED 76 260 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car05g01357 262 PANTHER PEROXIDASE 72-RELATED 9 76 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car05g01357 262 Gene3D Peroxidase, domain 2 105 241 - -
Car05g01357 262 PRINTS Haem peroxidase superfamily signature 62 76 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car05g01357 262 PRINTS Haem peroxidase superfamily signature 123 140 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car05g01357 262 PRINTS Haem peroxidase superfamily signature 182 197 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car05g01357 262 Pfam Peroxidase 77 226 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car05g01357 262 ProSitePatterns Peroxidases active site signature. 62 73 IPR019794 GO:0004601
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01357 Car-Chr5 57514958 57520726 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01357 29 76 Peroxidase AT5G05340 66.667 2.71e-16 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01357 K00430 - gmx:100813250 307.375