Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01355 ATGCATTCTACATCTCTTAAATGGCTAAGCCTTGTAGCCGTTATATGGCTCCAAGCGATAAATGGAACAAACACAAATTTCCCTGCTTACTCTTCCCAACTTAAACAACTTCTTTCTATTTCACAAATTCAACTCAACAACCTTGCTTTCGCCTCCGATGCCGGGAAACTTTTCGGTTGGTTTTCCGGCATCGCTGCTATTTACCTCCCTCTCTGGCTTGTCCTTATCATCGGTTTGACTCTCGGAGTAATCGGTTACGGTGTCCAATATCTTTTCGTAATCAACCAAATTTATTCTCTATCTTATTGGCATGTGTTCTTATTAACTTTTCTAGCTGGAAATGGCATTTGTTGGGTTAACACTGTTTGTTATGTTGTTGCCATAAGAAACTTCTTATCTAATAGCCAAGTTGCTGTGGGATTAATAACTAGTTATCAAGGATTAAGTGCAAAGATTTATACAAATATTGTTGATGTTGTTTCTCCACATAATAAGGCTAAGACTTTTCTAATCATGAACTCTCTAGTACCCATGGTTATTGGTTTAGTAGTAGCTCCTATAGTAAGAGAAATTGAAGTGGAAAATCCTAAGCATTCTAATGTTGGATTTGCTTTGATGTTTGTTATTACAATTGCAACTGGAATTTATGCTATGATGAGTAGTTTGCAATTTTTCACAAACAAAATATCATCACTTGGTATACTTATTGGTATTATAGTGTCACTTTTGTTTCCTCTATTACTTCCAATTTTTATGAAGATTAAAGAACTAGTGAAACCATGGAATGCAAATAAAGAAAGCGTGAGAGTCTACCATGTTACTATTATTGATGAGGAAAATATTGAAGACAATGAGGACAAAGAAAGTGAAGATTGTAGTGAAGTTGAAGATGTTTGTGTAATGGAAGAAATTGGAGTGAAGTTAATGTTGAGAAGAATGAATTTTTGGTTATATTTCTTGGTATATTTTTTGGGTGCAACAATTGGTTTAGTGTTTCTTAACAACTTGGGGCAAATAGCTGAATCCAGAGGTTGTTCTGCTACTTCATATTTGGTGTCTTTATCTTCTTCTTTTGGGTTTTTTGGCCGTCTCATTCCATCTCTATTGGACTACTTTTACAGGGGAAAATCTAGAATTTCAAGACCTGCTTCATTGGTAGCATTAATGGCACCAATATCATGTGCATTTTTCTTACTTATTAACAAAACTGATAATGCTCTTTACATAAGCACTGCTGTGATTGGAGTGTGTACTGGAGCAATCACTTCCATTGCTGTTTCCATAACAACTGATTTATTTGGCACAAAGAATTTCTCTGTTAACCATAATGTGGTTGTAGCCAATATTCCAATAGGGTCATTTTTATTTGGTTACTCAGCTGCACTTATTTACCATAAGGAAGGACATGGAAATGGAAAATGCATGGGCATGAGCTGTTACAACATCACTTTCATCATTTGGGGTTCTCTTTGTTTCCTTGGAACTTTATTGGCTTTGATTTTGCATACAAGGACTAGCAAATTTTACTCACATAAGCAATAG 1542 0.3528 MHSTSLKWLSLVAVIWLQAINGTNTNFPAYSSQLKQLLSISQIQLNNLAFASDAGKLFGWFSGIAAIYLPLWLVLIIGLTLGVIGYGVQYLFVINQIYSLSYWHVFLLTFLAGNGICWVNTVCYVVAIRNFLSNSQVAVGLITSYQGLSAKIYTNIVDVVSPHNKAKTFLIMNSLVPMVIGLVVAPIVREIEVENPKHSNVGFALMFVITIATGIYAMMSSLQFFTNKISSLGILIGIIVSLLFPLLLPIFMKIKELVKPWNANKESVRVYHVTIIDEENIEDNEDKESEDCSEVEDVCVMEEIGVKLMLRRMNFWLYFLVYFLGATIGLVFLNNLGQIAESRGCSATSYLVSLSSSFGFFGRLIPSLLDYFYRGKSRISRPASLVALMAPISCAFFLLINKTDNALYISTAVIGVCTGAITSIAVSITTDLFGTKNFSVNHNVVVANIPIGSFLFGYSAALIYHKEGHGNGKCMGMSCYNITFIIWGSLCFLGTLLALILHTRTSKFYSHKQ 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01355 513 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 3 512 - -
Car05g01355 513 Gene3D MFS general substrate transporter like domains 4 506 IPR036259 -
Car05g01355 513 SUPERFAMILY MFS general substrate transporter 5 507 IPR036259 -
Car05g01355 513 CDD MFS_Mch1p_like 6 495 - -
Car05g01355 513 PANTHER MAJOR FACILITATOR SUPERFAMILY PROTEIN 3 512 - -
Car05g01355 513 Pfam Nodulin-like 7 250 IPR010658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01355 Car-Chr5 57494349 57497109 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01355 1 512 Nodulin-like Gene Family AT2G30300 48.190 3.16e-149 435
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01355 - - gmx:100800763 709.523