Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01354 ATGGCTTTCCACTCACATTATAACATATTTTGCTTCTTTATTTTGTTTTCCTTTTTGGCTATGACCTCTGCTCAACTATCTTCAGATTTCTATGGAACAACTTGTCCCAAAGCTCTTTCTATCATAAACTCTGCAGTGTGTAGTGCAgtttctaaagagcaacgcatgggcgcttcgttgctccgtcttcattttcatgattgttttgtcaatggatgtgatgcatcagtcctattagatgacacttcgagcttcaccggagagaagtcagccggtgcaaatgtgaattctctaagaggttttgaagtgattgatgacattaaaactcagttggagactgcttgtcctggaattgtttcttgtgcagatattgttgctgttgctgctcgtgattctgttAAAGCAttgggtggtccatcatggagtgttgggttaggcagaagagattcaacaactgcaagtaaagatgctgccactaatgatattccatctcctttaatggatcttagtgacctcatatctgctttttcaaataagggatttactaccaatgagatggtagtcctttcggGAGCACATACAACAGGACAAGCAAGGTGCCAATTATTCAGAGGCAGGATTTACAATGAAACAACCATTGATTCAAATTTTGCAACCTCAGTGAAATCAAACTGTCCAAGCACTGGTGGTGATAGCAACCTTACCTCACTTGATGTCACAACCAATGTTTTATTTGACAATGCTTATTTCAAGAATCTAGTAAACAAAAAAGGACTTCTACATTCTGATCAACAGCTTTTCAGTGGTGGTTCTACTGACTCTCAAGTCACTACCTATAGCACAAGTCCTTCAACTTTCAATGCAGATTTTGCTAGTGCTATGGTGAAAATGGGAAACCTTAGTCCTTTAACAGGGAATAATGGTCAGATTAGGACTAATTGCCACAAAGTTAACTAA 957 0.2111 MAFHSHYNIFCFFILFSFLAMTSAQLSSDFYGTTCPKALSIINSAVCSAVSKEQRMGASLLRLHFHDCFVNGCDASVLLDDTSSFTGEKSAGANVNSLRGFEVIDDIKTQLETACPGIVSCADIVAVAARDSVKALGGPSWSVGLGRRDSTTASKDAATNDIPSPLMDLSDLISAFSNKGFTTNEMVVLSGAHTTGQARCQLFRGRIYNETTIDSNFATSVKSNCPSTGGDSNLTSLDVTTNVLFDNAYFKNLVNKKGLLHSDQQLFSGGSTDSQVTTYSTSPSTFNADFASAMVKMGNLSPLTGNNGQIRTNCHKVN 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01354 318 CDD secretory_peroxidase 25 317 IPR033905 GO:0004601|GO:0042744
Car05g01354 318 Pfam Peroxidase 45 281 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car05g01354 318 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car05g01354 318 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car05g01354 318 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car05g01354 318 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car05g01354 318 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car05g01354 318 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car05g01354 318 PRINTS Plant peroxidase signature 236 251 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car05g01354 318 PRINTS Plant peroxidase signature 252 269 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car05g01354 318 PRINTS Plant peroxidase signature 292 305 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car05g01354 318 Gene3D - 29 314 - -
Car05g01354 318 Gene3D Peroxidase, domain 2 163 297 - -
Car05g01354 318 PANTHER PEROXIDASE 72-RELATED 18 318 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car05g01354 318 ProSitePatterns Peroxidases active site signature. 57 68 IPR019794 GO:0004601
Car05g01354 318 SUPERFAMILY Heme-dependent peroxidases 25 318 IPR010255 GO:0004601|GO:0006979|GO:0020037
Car05g01354 318 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car05g01354 318 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car05g01354 318 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car05g01354 318 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car05g01354 318 PRINTS Haem peroxidase superfamily signature 238 253 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car05g01354 318 ProSiteProfiles Plant heme peroxidase family profile. 25 318 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car05g01354 318 PANTHER PEROXIDASE 18 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01354 Car-Chr5 57490681 57493692 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01354 21 318 Peroxidase AT5G05340 62.333 3.04e-137 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01354 K00430 - gmx:100818176 548.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01354 05 57490681 57493692 Car05g01354 05 57490681 57493692 ECH