Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01341 ATGATGGAGTTAGGCCAAGACAATCTCATTAGCAATTCTGCACCTGATGGAACAGAGTCACAGTTTGGTGGTTCCTTTGTTTGTCATACAGTTAATCATATCAATTCTAGGGGATATTGGTTTGGTGATAACCCACTTGAATTTTCTGTCCCTCTCTTCATGATCCAGATTTTTCTCATGTTCATTTTCACACGCTTTAGTTGCCTTATTCTCAAGCCTTTTGGTCAACCCTCTTTTGTTTCTAACATTCTTGGTGGTGTGACACTAGGTCCTTCAATTCTTGGACACAGCTCAGCATTTGCCAACAATTTTTTCCCAATAAAAGGAAGAAACGTTCTTGACACATTAGCATTTTTTGGTTTCATGTTATTCATTTTCTTACTTGGGGTAAAGATAGATCCAACCATCATTTTCAGATCAGGTAAAAAGACATTTGCCGTTGGAATTTTATGCTTCTTTATTCCTTACTCACTTGGCGGAATCGTTGCTTCAATCTTAAGTCACTTTGCATCATTGGATGAAGATATTTCCATGGTGCTTACTGCTGTGGTAGAAATTCAATGTGTCACAGCCTTTCCAGTAATTTCTTGCCTTCTTGCCGAACTCCAGATTCTCAATTCAGAAATCGGACGGTTGGCTTCGTCGGCTTCGCTAGTATGCGACGTATGCTTCAGTTTAGTATTGTCAATAAAGTATGCTGTTAAACTATCCTCCACAAAGTCAATAGGAGTAACAATTGGATCACTTTTTTCCACAACTCTTCTTATTTTGTTCATAGTGTTTGTTGTTCATCCAGCTGCATTATGGGCTATTCAACACACACCAGAGGGAAAACCTGTTCAAGAAATTTACATTTGTGTAACTCTTATAACAGTAATATTCTGTGGATTCATTGGTGAAGTCATTGGCATAGATGCAATCATTGTATCTTTTCTGGTAGGACTAGCTATACCTGATGGTCCTCCATTAGGAGCAGCATTGGTAGATAAACTTGAGTATTTTGTTTCAGTAGTGCTTTTACCTAACCTTTTTGTTATTGTTGGATTGAGGACAGATGTTTTTGCTATACAAAAGATGAAGAATGTGGGAATCATTGAGTTGATTATTTTCATTTCAATTTTTGGTAAAATTATAGGGGCTTTATTGCCTCTACTTTTCTCTAGGATGCCATTGAGAGATGCACTTTCTCTTGGTCTTATTATGAACTGCAAAGGCACTGTTGAATTGGCACTTTTGATCAACTTGAGATTGACAAATGTTATGAATGATGAATTGTTTGCAATTATGGTTCTTACATTAGTTCTTGTAACCGGCATTGTGTCACCTATTGTGAGAGCTCTATATGATCCTTCAAGGAGGTTTCTTGCTTACAAAAGGAGGACAATCTTGCATCACCAAAGTGATCAAGAATTCCGAATACTAGCTTGCATTCACAAACAAGATAATGTGTTAGCTATTTTGAACCTCCTCTCAGCTTCAAATCCGACAGAAACAACCCGCATCGACTTAGTTGTACTACAGCTTGTTAAGCTTGTAGGAAGAGCTTCTTCTGTTCTTGTTGCACATATACCGCGCGAAAAGCCTAGCGAAAAAATCTTCAACTCATTCAGCAAATTTGAAGATGCTTATAGAGGAAAAGTCACATTGCATTGCTATAAAGGTATCTCACCATATGCTACAATGCACAATGATGTATGCTACTTAGCACTTGAAAAAAGAACAACATTCATAATCATACCATTCCATAAACAATGGATAATTGGAGGCATGGCCGAGTCATCTTTCGCCTTCAAGCAACTCAATAAAAATGTTCTTGACAAAGCTCCTTGTTCGGTCGGTGTCCTAATCGACCGAGGCAATCAGAAGAAATTCTGGTGTGGCTATTTGAATGAATCAACATATCTAGTTGCCGTGTTTTTCTTTGGAGGCGCGGACGATAGAGAATCACTTGCATACGCGAAACGTATGTTGGATCAACCTAATGTAAATGTTACTCTCTTTCATTTTTCATCGTCCAAAAATATTGTTGGTGGAACTGATAGAAGCAAAAGGCTTGATACTCAAATATTAAGTGAGTTTAGACTAAGTGCTTTTCGGAATGATAGAGTTTCTTACAGAGAAGAGAATGTAATGAATGGAAGAGATGTTCTTTCAGTTATTGAATACATGGAGAGTTTTTATGACCTTGTCATGGTTGGTAGAAGGCATGAAGATTCACAGTTAATGTCTGAACTTAGAAAATGGAAGCATGGTGAATTGGGAACTGTAGGAGAGATTCTTGCATCTTTAAATATTGGAGCTAAAACATCAATTTTGGTTGTGCAACAACAAATTAGATTTTGGGGGTCACGTGATCCAGAGGAATCTACACACTTGAGAAGAGTAAATAATAGCAATGTTTAG 2403 0.3754 MMELGQDNLISNSAPDGTESQFGGSFVCHTVNHINSRGYWFGDNPLEFSVPLFMIQIFLMFIFTRFSCLILKPFGQPSFVSNILGGVTLGPSILGHSSAFANNFFPIKGRNVLDTLAFFGFMLFIFLLGVKIDPTIIFRSGKKTFAVGILCFFIPYSLGGIVASILSHFASLDEDISMVLTAVVEIQCVTAFPVISCLLAELQILNSEIGRLASSASLVCDVCFSLVLSIKYAVKLSSTKSIGVTIGSLFSTTLLILFIVFVVHPAALWAIQHTPEGKPVQEIYICVTLITVIFCGFIGEVIGIDAIIVSFLVGLAIPDGPPLGAALVDKLEYFVSVVLLPNLFVIVGLRTDVFAIQKMKNVGIIELIIFISIFGKIIGALLPLLFSRMPLRDALSLGLIMNCKGTVELALLINLRLTNVMNDELFAIMVLTLVLVTGIVSPIVRALYDPSRRFLAYKRRTILHHQSDQEFRILACIHKQDNVLAILNLLSASNPTETTRIDLVVLQLVKLVGRASSVLVAHIPREKPSEKIFNSFSKFEDAYRGKVTLHCYKGISPYATMHNDVCYLALEKRTTFIIIPFHKQWIIGGMAESSFAFKQLNKNVLDKAPCSVGVLIDRGNQKKFWCGYLNESTYLVAVFFFGGADDRESLAYAKRMLDQPNVNVTLFHFSSSKNIVGGTDRSKRLDTQILSEFRLSAFRNDRVSYREENVMNGRDVLSVIEYMESFYDLVMVGRRHEDSQLMSELRKWKHGELGTVGEILASLNIGAKTSILVVQQQIRFWGSRDPEESTHLRRVNNSNV 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01341 800 PANTHER CATION/H + ANTIPORTER 20 783 - -
Car05g01341 800 PANTHER OS08G0117800 PROTEIN 20 783 - -
Car05g01341 800 Pfam Sodium/hydrogen exchanger family 61 444 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Car05g01341 800 Gene3D - 52 454 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01341 Car-Chr5 57333981 57337284 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01341 19 791 Antiporter Super Family AT2G13620 39.259 0.0 543
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01341 - - gmx:102665255 1162.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01341 05 57333981 57337284 Car05g01341 05 57333981 57337284 ECH
Car05g01341 05 57333981 57337284 Car02g01411 02 40816438 40820883 PCT