Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01340 ATGGCAAAGAATATTGAAAGACTAGATGAATTGACTTCCTTTGGATTGATTTACGATGAGAAACTAGTATGTCAATACATTCATAGAGAGATAAACAGGGGTATATTTTATGGAGATAATCCTTTTGGTGCAACCACATCTATGCTAACAGTTCAGATTCTTCTGATGTTCATTTTAACTAGAATTACTCATTTCTTGTTAAGTCCTTGTCATCAAACTTACCTTGTTTCACAAATTGTGGCTGGTATCATATTGGGTCCTGTATTGTTAGGTCGAAATATTCATAGTTTTGATATGTTATTTCCAGCAACAAGCATATTGACACTTTCAACATTTGCAGAATTTGGCATGATAATACATTTCTTTAAGATGGGAGTGGAAGTAAATACGAAACAATTGTTGATGATGGAAAAACGTGCAGTAGTAATTGGATTACTAGGCCACATAAGTTCTATCGTTTTTGGCATTATAGTTGTATTTGGTGTTGAAGCAATATTCACTCCTTTTGGAAGGGAAAGATATGGTATTTTCAATTTGGTAATTATTGGTTCATTAACCTCATTTCCTGCTATAAGTAACTTTCTAAGTGAGATGAACATTCTAAATTCAGAAATTGGACGCATGGCATTATCTACATCATTGGTTTGTGATGCATGCATGTGGCTATTTTATTTGATCATTGTGAATGGAGGGAAAGCCTTTATACAAAAAACAAATGAATTTCTTCCACAATTGGTTATATCAGTTTGTTATTTTATATTATTATTTTTTATGTTAAGACCATTGGTTATATGGATCTCCAACCGCAACCCAAAGGGAAAACCAATGACAGAAAGTCATTTTGTGTTAATCATTTGTGTACTTATGTTGGTTGGATACTCTGCACAAGTTACTGGACAACCTTCttttgttgttgccttttggtttggtttggttttgCCGGAAGGTCCTCCTTTAGGTTCAATTTTGGCAGAAAGACTTGATATTGTTGGTTCTACTTTCATTGTTCCAGCTTATTGTACTATTAGTGGGTTAAAGACATGTGTTCCTGATATAACAGGGTCACGTACAATAAGCATGACCCTTATTTTTTTGGCTGGGTATATAGGAAAGTTTGTAGGAACTTTACTACCTTCACTTCACTTTCAGATTGAATTTTGGGATTCTCTTGTTTTGTCTCTAATCATGTGTTGCAAAGGCCTCATGGATCTCTGTTTGATGAACGTATTATTGCACACTAAGGCAATAGGTGAACTTGCATTCACCATGATGCTATATACTATGGTGGCCATAACAGGGTTTTCAACACTAATTGTTTTCTACATATATGACCCTTCAAGGAGGTACAAAACCTATATAAGAAGATCAATTAAGGGCTCACAAAATGAATTTGATCTCAAAATACTTGTATGCATCCACAATGAAGAAAATGTCTATCCAATGATCAATCTTCTTCAAGCCTCAAATCCAACAAATACTACACCTCTCTCAATCTTTGTTCTTCATCTAATGGAACTTTCAGGCAGAGCAGCCTCAATCCTTAGAAAAAATGACTATACTAATAATAATGACAAATCTCATTCTTATAAAGAGATTTCAACTAGTGAACACATAAACAATGTGTTTAATCAATTTCTATTGCATAACCAAGGATGTGTCACATTGCAATGTTTTACAGCAATTGCACCATACACAAGTATGCATGATGATATATGTTACATGGCAATGGATACAAAATCAAACCTTGTAATTGTGCCATATCATAAGCAATGGTCCATGGATCAAAATTTCGAAGTGTCGAATGCTTCGATTAGGACATTGAATCAAAAAGCACTAAACAAATCTCCTTGCTCGGTCGGAATCTTAATCGATCGAAGCGAAAAGAATGGAAAGATTTCAGTTATAAATGAAAAAACAAATTGTGAAGTTGCAATGATTTTCTTAGGTGGTGCTGATGACCAAGAAGCATTAGCATATGGTATGCGTATAGCTGAACATTCAAAAGTAAGACTAACGGTAATTTGGGTAAGAATCAAAACACAACAACACAAAGATTGGAACATAAAAAATCCTTACATAGATTTGATGGAACGTGCAAAGTATACAGGTAACCTTGAAGGAAAAGTGTTTTTTAAGGAAGAGATTGTGGAAGATGGGGAAGGAACAGCACAAGTTATTCGTAGGTTGGAAGGACGTTTTAATTTTGTGATAGTTGGTAGGCATCATATAGTAAATTCTCCATGTACATTGGGCTTGACTGAATGGTGTGAACTTCCTGAGCTTGGCCCACTTGGAAATCTACTAGCTATGTCTGATTTTACATTTTCTGTATTGGTGGTGCAACAACAACCATTTAATAATGAATTTTGGTATGTTAGGTGA 2382 0.3413 MAKNIERLDELTSFGLIYDEKLVCQYIHREINRGIFYGDNPFGATTSMLTVQILLMFILTRITHFLLSPCHQTYLVSQIVAGIILGPVLLGRNIHSFDMLFPATSILTLSTFAEFGMIIHFFKMGVEVNTKQLLMMEKRAVVIGLLGHISSIVFGIIVVFGVEAIFTPFGRERYGIFNLVIIGSLTSFPAISNFLSEMNILNSEIGRMALSTSLVCDACMWLFYLIIVNGGKAFIQKTNEFLPQLVISVCYFILLFFMLRPLVIWISNRNPKGKPMTESHFVLIICVLMLVGYSAQVTGQPSFVVAFWFGLVLPEGPPLGSILAERLDIVGSTFIVPAYCTISGLKTCVPDITGSRTISMTLIFLAGYIGKFVGTLLPSLHFQIEFWDSLVLSLIMCCKGLMDLCLMNVLLHTKAIGELAFTMMLYTMVAITGFSTLIVFYIYDPSRRYKTYIRRSIKGSQNEFDLKILVCIHNEENVYPMINLLQASNPTNTTPLSIFVLHLMELSGRAASILRKNDYTNNNDKSHSYKEISTSEHINNVFNQFLLHNQGCVTLQCFTAIAPYTSMHDDICYMAMDTKSNLVIVPYHKQWSMDQNFEVSNASIRTLNQKALNKSPCSVGILIDRSEKNGKISVINEKTNCEVAMIFLGGADDQEALAYGMRIAEHSKVRLTVIWVRIKTQQHKDWNIKNPYIDLMERAKYTGNLEGKVFFKEEIVEDGEGTAQVIRRLEGRFNFVIVGRHHIVNSPCTLGLTEWCELPELGPLGNLLAMSDFTFSVLVVQQQPFNNEFWYVR 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01340 793 PANTHER CATION/H + ANTIPORTER 35 784 - -
Car05g01340 793 PANTHER CATION/H(+) ANTIPORTER 14 35 784 - -
Car05g01340 793 Pfam Sodium/hydrogen exchanger family 55 435 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Car05g01340 793 Gene3D - 46 450 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01340 Car-Chr5 57328429 57331637 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01340 20 783 Antiporter Super Family AT1G06970 35.668 1.34e-163 493
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01340 - - gsj:114396278 1033.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01340 05 57328429 57331637 Car05g01340 05 57328429 57331637 ECH