Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01338 ATGGCTGAAAACGGCGAAGAGAAGTTACTCGCTGTGGCACGCCACATAGCAAAGACGCTGGGCCACAACAACATCAACATGGCCGATGATATCCTCCAAATATTCTCAAACTTCGACGGTAGATTTTCTAAAGAGAAGCTATCCGACGAAGGTGCAGGGAATGATCCCATGCGCTACGCTGCGCTTGAACGAACTCTTAACTCTCTTATTCGACGGATTTCCCATCATCTGTCATCCGAAAATCCTATATGCTATAATTCCGCCGATTTTGTCGCCGCCGTTGACGAACTGCTTGCTACTATCGGCGACTGGAGTCCACTCTCCGATGACAAAACCGTTGGCGCATGCCTCCTCCGCGCCGATGACATGCTTCAGCAGGTTATGTTTCGTGCAGGGGAAGAGTTTCGCTCACTCATGGAACTTGGCGGTGAGTCGTTTGACTTGGCTCGGAACAACGGCGAGTCAACTCAGAACGGAAACTCACTTTACGACTCGAACGACGATGAAGAAGAAACTGACGGCGAGGAGGACCTGACTCCGGTGGCGAAGCCGGTTACCAATTATGACGTTGTAATTGATGCACTTCCGCCGTCTACGGTGAACGATCTCCGGGAAATCGCAAGACGCATGTTGGCGGCGGGGTTTGGGAAGGAGTGCTCACACGTGTACGTTAGTTGCAGGAGGCAGTTCTTAGAGGAGAGTTTCTCGAGGTTAGGGTTACAGAAACTAAGCATTTCAGAAGTTCACAAGATGCAATGGCAGGAGCTTGAAGACGAGATCGAACGATGGATTAAGGCCTCTAACGTCGCTCTCAAAATCCTCTTCCCAAGCGAGCGGCGTCTCTGCGATCGAGTCTTCTCCGGTTTGTCTTCCTCAGCCGCCGCCGCCGATCTCTCCTTCATGGAGGTCTGCCGCGGATCAGCGAATCAGCTTTTGAACTTCGCCGATGCCGTCGCTATCGGAAGTCGCTCGCCTGAACGGTTGTTCAGAGTCCTCGACGTGTTCGAAACCATGCGTGACCTAATTCCCGAATTCGAATCACTATTCTCCGATCAGTATTGCTCGTTCCTCGTTATCGAAGCGATCACGATTTGGAAGAGGTTAGGCGAAGCAATTAGAGGAATTTTCGTAGAATTAGAGAAACTGATCAGCCGTGATCCGGTCAAGGCGATGGTTCCCGGTGGCGGTCTTCATCCCATCACTCGTTATGTGATGAACTACCTCCGCGCCGTGTGCCGGTCGCATCAAACCTTAGAATTAGTTTTCAAAGACGATGGACTTTCATTGAAGGATTACCCTAAGCACGATGATAGTTTACAATCAAATTCTTCGTTTTCGGTTCAAATTTCTTGGATTATGGATTTGTTAGAACGCAATTTGGAAGCAAAGTCTAAAATTTACAAAGACCCTGCTTTGTGCTCTGTTTTTATGATGAATAATGGGAGGTACATTGTTCAAAAGGCTAAAGACAGTGAATTAGGGAAACTTTTGGGTGATGATTGGATCAAAAAACACACTGCCAAAATTCGACAATACCATTCGAGCTATCAAAGAAGCtcatgtaacaatttgttggggtttctgaaggtggagacattggctgcaaagcccatgaagGAGAAACTCAAGATGTTCAATCTGCATTTTGAAGAGATATGTAGGGTTCAATCTCAGTGGGTTATCTTTGATGAACAGCTCAGGGAAGAAATAAGGATCTCCATTGAAAAGCTCTTGTTGCCTGCATATGGAAGTTTTATTGGAAGGTTCCAAAGTGTTCCGGAGCTAGTTAAGAATGGTGATAGGTATATCAAGTTTGGAATGGAGGACATTGAAGCTCGGGTTAACAAATTGTTTCAGGGAAATGGTGGCCGAAAGTGA 1878 0.4574 MAENGEEKLLAVARHIAKTLGHNNINMADDILQIFSNFDGRFSKEKLSDEGAGNDPMRYAALERTLNSLIRRISHHLSSENPICYNSADFVAAVDELLATIGDWSPLSDDKTVGACLLRADDMLQQVMFRAGEEFRSLMELGGESFDLARNNGESTQNGNSLYDSNDDEEETDGEEDLTPVAKPVTNYDVVIDALPPSTVNDLREIARRMLAAGFGKECSHVYVSCRRQFLEESFSRLGLQKLSISEVHKMQWQELEDEIERWIKASNVALKILFPSERRLCDRVFSGLSSSAAAADLSFMEVCRGSANQLLNFADAVAIGSRSPERLFRVLDVFETMRDLIPEFESLFSDQYCSFLVIEAITIWKRLGEAIRGIFVELEKLISRDPVKAMVPGGGLHPITRYVMNYLRAVCRSHQTLELVFKDDGLSLKDYPKHDDSLQSNSSFSVQISWIMDLLERNLEAKSKIYKDPALCSVFMMNNGRYIVQKAKDSELGKLLGDDWIKKHTAKIRQYHSSYQRSSCNNLLGFLKVETLAAKPMKEKLKMFNLHFEEICRVQSQWVIFDEQLREEIRISIEKLLLPAYGSFIGRFQSVPELVKNGDRYIKFGMEDIEARVNKLFQGNGGRK 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01338 625 PANTHER EXOCYST COMPLEX COMPONENT EXO70B1 30 619 - -
Car05g01338 625 SUPERFAMILY Cullin repeat-like 85 618 IPR016159 -
Car05g01338 625 MobiDBLite consensus disorder prediction 149 163 - -
Car05g01338 625 Pfam Exo70 exocyst complex subunit 261 615 IPR046364 GO:0000145|GO:0005546|GO:0006887
Car05g01338 625 PANTHER EXOCYST COMPLEX PROTEIN EXO70 30 619 IPR004140 GO:0000145|GO:0006887
Car05g01338 625 MobiDBLite consensus disorder prediction 148 177 - -
Car05g01338 625 Gene3D Exocyst complex component Exo70 72 624 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01338 Car-Chr5 57309239 57311681 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01338 1 625 EXO70 exocyst subunit family AT5G58430 66.248 0.0 828
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01338 K07195 - gmx:100803694 840.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01338 05 57309239 57311681 Car05g01338 05 57309239 57311681 ECH