Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01326 ATGTGCACCTTCTTAGACAGTTCCGACTGGAGTGAACCTTGGTCCCGCATCAAAAGGTGGGGTCAACCTGAATTATGGTCATGCCTTGTGAAAAGGGACAAAAACTACACTACCGAATTATGGTCATGCCTTGTGAAAGGGGACGAACATGATGCTATTTTTCCATGTACTCGCCAATATTTTCTTCGTGGCCATGCTATATTTATAGAAAACCTCGAACAAGACATCATAGTATCACCCAAACGCATTTTCACTGCAGGCTTCTACCCCGTTGGTGAAAACGCTTATTCCTTCGCAATATGGTTCACGCAAAAACACAAACACCTTAACGACGCCACCATTGTTTGGATGGCAAACCGTGACCAACCAGTCAACGGAAAAAAGTCAACACTTTCCCTTCTCAAAACCGGTAACCTTATATTAACCGACGCAGCTCAATCCATCGTTTGGTCCACAAACACCGCCTCATCAAAACCACTCCAATTATCCCTCCGCGACACCGGAAACCTAATTCTCCAAGAACACAATAATTCCAATTCCATCATTTTATGGCAAAGTTTCGATTTCCCAACAGACACACTTCTTCCACAACAAACCCTCACAACATTCACAAAACTCATATCCTCAAGAAGCGAAACAAACTATTCCTCTGGCTTCTACAAACTATTTTTTGACAACTACAATCTTCTCTGTCTTGTTTACGACGGTCTTGAAGTTTCAAGCGTTTATTGGCCGGATCCTTTGATTCTAGATTGGCAAACTTCAAGGTCCACGTACAATAGTAACAGGGTAGCAACATTAAATCGTTTTGGAAATTTCAGTTCTTCAGATGGTTTCACATTCAGAACAAGTGATTATGGGACAGTGCTACAACGAAGATTGAAACTTGATTTTGATGGTAATGTCCGTGTTTATAGTAGAGAAAATGGACAAGAAAAATGGTCAATGTCAGGTCAATTCAATCAACAACCTTGTAAAATACATGGGATTTGTGGACCTAATAGCACTTGTAGTTATGATCCAATAACTGGTAGAAAATGTTATTGTCTTCCTGGTTATAGTATAATCAATAACCAAGATTGGTCTCAAGGATGCAAACCAAGCTTTCAAGTTTCATGCAACAACAACAACAAGTTAGAGTCTCGCTTCAAATTGTTACCACATGTTGAGTTTTATGACTATGACTATGGATTCCAGAAAAACTATACCTATAAACATTGTAAGCATTTGTGTTTGCGATTGTGCGAATGCATAGCCTTCCAATTTCGGTATGTGAAAAACAAAGGTTTGTTTAATTGTTACCCGAAGACACGGTTACTAAACGGTCGTAGTTCGACAAAGTTCGGAGGTTCACTCTTTTTGAGATTGCCCAAAAATAATTCTCTTTTTTCCCATGAAAACTCTGTCGAAGAAGATGTCAATAGCTTGGTTTGTTTGAGAAATGAAGGAGTAAAACAACTGGGTAGATCATACGTCAATGCAAAAGAAAATGGTTCTCTGAAGTTTATGCTTCGGTTTGCTGGTGGTTTAGGAGGAGTTGAGCTTTTGGGATTTTTTCTTGTTTGGTGTTTCTTGTTTAGGAGTAGCAAAAATTCTAATGAAGACAACAATGGTTATGTTCTTGCAGCAGCAACAGGGTTTAGGAGATTTAATTACTCAGAATTGAAACAAGCTACAAAAGGTTTTAGCCAAGAGATTGGATGTGGTGCTGGTGGAAAAGTTTATAAAGGTGTTTTATCTGATAATAGAATTGCTGCAATAAAGCGTTTGCATGAAGCGCATCATGGAGAGAGTGAGAGTGAGTTTCTTGCTGAAGTTAACATCATTGGAAGGCTTAATCACATGAACTTAATTGGTATGTGGGGTTATTGTGCAGAAGGGAAACATAGATTATTGGTTTATGAGTACATGGAAAAAGGTACTTTAGCTGATAATCTCTCATCAAATGAACTTGATTGGGGTAAAAGGTATAACATTGCTTTAGGAACTGCAAAGGGTCTTGCTTATTTACATGAAGAGTGTTTGGAATGGGTTTTGCATTGTGATATAAAGCCTCAAAACATACTTGTTGACTCTGATTACCAACCTAAAGTAGCAGATTTTGGTTTGTCTAAGCTGTTGAATAGAGATGATCTCAACAATTCAAACTTTTCAAGGATAAGAGGGACAAGAGGTTACATGGCACCTGAATGGGTTTTCAACTCACAAATCACTTCTAAGGTTGATGTTTATAGCTATGGTGTTGTTGTGTTGGAGATGATTACCGGAAAGAGTCCAACAACAGGTATTCAAATCAAAGATGGAGAAGAGTTGTGTCATGAGAGATTGGTAACATGGGTTAGGGAGAAAAGGAGAAAGGGTATTGAAGTTGGTTGTTGGGTGGAACAAATTGTTGACCCTGCATTGGGATCAAATTATGATGTAAAGAAAATGGAGACTTTGGCAAATGTGGCTTTGGATTGTGTGGCTGAAGAGAGAGACATGAGACCAAGCATGAGTCAAGTTGTTGAGAGGCTGCAAAGTCAATCAGCATCATACTTGATAGTATTCACGAATTAA 2559 0.3877 MCTFLDSSDWSEPWSRIKRWGQPELWSCLVKRDKNYTTELWSCLVKGDEHDAIFPCTRQYFLRGHAIFIENLEQDIIVSPKRIFTAGFYPVGENAYSFAIWFTQKHKHLNDATIVWMANRDQPVNGKKSTLSLLKTGNLILTDAAQSIVWSTNTASSKPLQLSLRDTGNLILQEHNNSNSIILWQSFDFPTDTLLPQQTLTTFTKLISSRSETNYSSGFYKLFFDNYNLLCLVYDGLEVSSVYWPDPLILDWQTSRSTYNSNRVATLNRFGNFSSSDGFTFRTSDYGTVLQRRLKLDFDGNVRVYSRENGQEKWSMSGQFNQQPCKIHGICGPNSTCSYDPITGRKCYCLPGYSIINNQDWSQGCKPSFQVSCNNNNKLESRFKLLPHVEFYDYDYGFQKNYTYKHCKHLCLRLCECIAFQFRYVKNKGLFNCYPKTRLLNGRSSTKFGGSLFLRLPKNNSLFSHENSVEEDVNSLVCLRNEGVKQLGRSYVNAKENGSLKFMLRFAGGLGGVELLGFFLVWCFLFRSSKNSNEDNNGYVLAAATGFRRFNYSELKQATKGFSQEIGCGAGGKVYKGVLSDNRIAAIKRLHEAHHGESESEFLAEVNIIGRLNHMNLIGMWGYCAEGKHRLLVYEYMEKGTLADNLSSNELDWGKRYNIALGTAKGLAYLHEECLEWVLHCDIKPQNILVDSDYQPKVADFGLSKLLNRDDLNNSNFSRIRGTRGYMAPEWVFNSQITSKVDVYSYGVVVLEMITGKSPTTGIQIKDGEELCHERLVTWVREKRRKGIEVGCWVEQIVDPALGSNYDVKKMETLANVALDCVAEERDMRPSMSQVVERLQSQSASYLIVFTN 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01326 852 ProSitePatterns Serine/Threonine protein kinases active-site signature. 678 690 IPR008271 GO:0004672|GO:0006468
Car05g01326 852 ProSiteProfiles PAN/Apple domain profile. 373 457 IPR003609 -
Car05g01326 852 PIRSF SRK 53 850 IPR024171 GO:0004674
Car05g01326 852 SMART serkin_6 560 847 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g01326 852 CDD B_lectin 77 190 IPR001480 -
Car05g01326 852 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 70 843 - -
Car05g01326 852 Gene3D - 190 316 IPR036426 -
Car05g01326 852 CDD PAN_AP_plant 369 457 - -
Car05g01326 852 Gene3D Phosphorylase Kinase; domain 1 526 636 - -
Car05g01326 852 SUPERFAMILY Protein kinase-like (PK-like) 541 839 IPR011009 -
Car05g01326 852 Pfam D-mannose binding lectin 113 202 IPR001480 -
Car05g01326 852 Gene3D - 71 189 IPR036426 -
Car05g01326 852 Gene3D Transferase(Phosphotransferase) domain 1 637 847 - -
Car05g01326 852 ProSiteProfiles Bulb-type lectin domain profile. 74 185 IPR001480 -
Car05g01326 852 CDD STKc_IRAK 566 840 - -
Car05g01326 852 ProSiteProfiles EGF-like domain profile. 321 359 IPR000742 -
Car05g01326 852 SUPERFAMILY alpha-D-mannose-specific plant lectins 114 207 IPR036426 -
Car05g01326 852 ProSiteProfiles Protein kinase domain profile. 560 847 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g01326 852 ProSitePatterns Protein kinases ATP-binding region signature. 566 588 IPR017441 GO:0005524
Car05g01326 852 Pfam S-locus glycoprotein domain 275 354 IPR000858 GO:0048544
Car05g01326 852 PANTHER SERINE/THREONINE KINASE, PLANT-TYPE PROTEIN 70 843 - -
Car05g01326 852 SMART blect_4 68 190 IPR001480 -
Car05g01326 852 Pfam Protein kinase domain 563 837 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01326 Car-Chr5 57188845 57191572 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01326 550 841 Trihelix Transcription Factor Family AT5G38560 42.761 1.89e-66 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Car05g01326 Pkinase 1.5e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01326 - - gmx:100808940 1039.64