Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01314 ATGGCCGCAGCATTAGAATGCTGGTCAAGACGCATCAACAACAGCAACACCAACGACGATGATGATGAGGACACGGTAGAACAACAAGTTCTCATGAACAATAACAACCCATCTTCTCAACCTAACAACAAAGACTCTTCAATCATTCACAAGAAGTTCAACAAACTCACCCGCAATGTTTCTGAGGCTATTGCTTCGATAAAAAACACACTCAACATTAACCTTAACATCAACCTCGACTCTTCCAAAACTGACAATACTTGTCGCGGTAGTAACAATAATAACCTCGTTTGGGGAACCGTTGTGAGGAATCTCACTCAGCTTTACCCTGGTAGCCAGCTTCCTGAGAAGCTCATGTCCAACATTCGTAAACACTATGATTCGCTGCCTCCTAGTTATTCACAGGCTGGGTTTGATGTTAAAGATGTGTTTCTTCACATCAAGCTGATAGAGCAAGCATTCGAAGATTCGCAGGCTGCGATTTTGATTGAAGAGGAGTGTGACGGAGAAATGGAGCTTCAGGGATCTTTGTTCAAGTTGACATTTGCTTGCAACTCTCCGATTTCATGGCCTGCTATGTCGAATGCGTTGGATAGTTCCTCCATTTGTTGCAAGAAGATTCAGATCTTTGAGAAGAAAGGTCTCACCCTTGGAATTGTACTTCTACTTGTTCTGTCTGGGGTTGGACAAGATAAGTTGGTTAGGACCCGGGTTGAAAGTGCTCTCAAGTTTGCCATGAAGAAGCCGAAAGCCAGTGTTGTGAAGCTGCCTTTTGGGCTTTGTGGATGCCAAGAGGAGAATTTCAAGAGGAGAGAACTTGGAGAGATTGAAGAAGATGGTAACGGTGTATACTGTGGAAACGGGTTTGAGAATTTGAGTCAAAAGATTCAGCTTCAAGTGCCATTGCTTGATTCATCGTTTCATGTATCGGTAGATGAATGGCAGACTATTCAGACAGGTGCGGATGAGGTAGAAAAATGGTTGTTGAATTCAGATAGTCTCGAGTTTTTGGAACAGATCGGACCTAATTCGTATAAAGGAGCCTACATGGGGAAAAGAGTCGGCATCGAGAAGCTCAGAGGGTGCGACAAAGGAAACTTGTACGAGTTTGCGCTCAGGAAAGATATGCTAGAACTGATGACATGCGGACATAAAAACATTTTGCAGTTTTGTGGAGTTTGTGTAGATGAAAATCACGGGTTATGCGTAGTGACGAAATTCATGGAAGGTGGATCTGTTCACGACTTAATTTCAAAGAACAAGAAGCTTCAGAGCAAGGATATTGTAAGAATTGCAGTTGACGTGGCTGAAGGGATCAAGTTTATGAACGATCACGGTGTTGCATATCGAGACCTTAATACTCAGAGGATTCTGTTGGATAAACATGGGAGTGCTTGCTTGGGAGATATGGGTATAGTTATTGCTTGCAAGAGCAACCATGAGGCAATGGACTACGAAACCGATGGTTACCGGTGGCTCGCTCCAGAGATAATTGCCGGTGACCCCGAGAGTGTCACAGAGACATGGATGAGTAATGTTTATAGTTACGGAATGGTAATTTGGGAGATGGTAACCGGTGAAGCAGCCTATTCCGCCTATTCACCTGTGCAGGCAGCAGTAGGCATTGCGGCTTGTGGCCTTAGACCTGAGATCCCCAAAGACTGTCCGCAAACTCTAAAATCTCTAATGACAAAGTGCTGGAACAATGCCCCTTCGAAACGCCCCCAATTCTCTGAAATTTTATCGATATTGCTTCGACAAAACAACAACAATAGGTAA 1779 0.439 MAAALECWSRRINNSNTNDDDDEDTVEQQVLMNNNNPSSQPNNKDSSIIHKKFNKLTRNVSEAIASIKNTLNINLNINLDSSKTDNTCRGSNNNNLVWGTVVRNLTQLYPGSQLPEKLMSNIRKHYDSLPPSYSQAGFDVKDVFLHIKLIEQAFEDSQAAILIEEECDGEMELQGSLFKLTFACNSPISWPAMSNALDSSSICCKKIQIFEKKGLTLGIVLLLVLSGVGQDKLVRTRVESALKFAMKKPKASVVKLPFGLCGCQEENFKRRELGEIEEDGNGVYCGNGFENLSQKIQLQVPLLDSSFHVSVDEWQTIQTGADEVEKWLLNSDSLEFLEQIGPNSYKGAYMGKRVGIEKLRGCDKGNLYEFALRKDMLELMTCGHKNILQFCGVCVDENHGLCVVTKFMEGGSVHDLISKNKKLQSKDIVRIAVDVAEGIKFMNDHGVAYRDLNTQRILLDKHGSACLGDMGIVIACKSNHEAMDYETDGYRWLAPEIIAGDPESVTETWMSNVYSYGMVIWEMVTGEAAYSAYSPVQAAVGIAACGLRPEIPKDCPQTLKSLMTKCWNNAPSKRPQFSEILSILLRQNNNNR 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01314 592 Pfam Protein tyrosine and serine/threonine kinase 374 583 IPR001245 GO:0004672|GO:0006468
Car05g01314 592 ProSiteProfiles Protein kinase domain profile. 334 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g01314 592 PANTHER SERINE-THREONINE PROTEIN KINASE 1 588 - -
Car05g01314 592 SUPERFAMILY Protein kinase-like (PK-like) 322 588 IPR011009 -
Car05g01314 592 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 588 - -
Car05g01314 592 Gene3D Transferase(Phosphotransferase) domain 1 327 590 - -
Car05g01314 592 PRINTS Tyrosine kinase catalytic domain signature 405 418 IPR001245 GO:0004672|GO:0006468
Car05g01314 592 PRINTS Tyrosine kinase catalytic domain signature 441 459 IPR001245 GO:0004672|GO:0006468
Car05g01314 592 PRINTS Tyrosine kinase catalytic domain signature 511 533 IPR001245 GO:0004672|GO:0006468
Car05g01314 592 PRINTS Tyrosine kinase catalytic domain signature 555 577 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01314 Car-Chr5 57017642 57021597 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01314 317 584 MAP Kinase Kinase Kinase AT2G17700 34.892 4.01e-52 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-7 Car05g01314 PK_Tyr_Ser-Thr 3.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01314 - - gmx:100811417 906.746
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01314 05 57017642 57021597 Car05g01314 05 57017642 57021597 ECH
Car05g01314 05 57017642 57021597 Car02g01371 02 40046939 40051026 PCT