Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01310 ATGGCTGCTGAGCAAGGTGGCAGATTTTCCTCCATTGAAGTACCTCTTTTGAATGATGAAAAAGTGTATCATGTGAATAGTTCCAATGAGGCAGTGACAAAAATTAAGGAACAACAACACCAGACGGTTCATGTGGGTAATGCTTCTTTGTTCAAAACTGGCTTCCATCTTGTTAATGCTATCTCAGGAGTTGGTATTGTTTCAATACCATATGCACTAGCATCAGGAGGATGGTTAAGCATAATATTACTATTTATTATAGCCATTGCATGTTGTTACACAGGAACATTGGTAAAAAAATGCATGGACATGGATCTTGAAATCAGAACATTTTCTGACATAGGTCAACATGCATTTGGAAACAAAGGAAGATTAATAGTATCTATCATCATGAATTCTGAACTGTATTTAGCAGTAACAGGTTTTCTGATTTTAGAAGGAGATAATCTAAATAAACTAGTACCAAACATGGAAATTCATCTACCATGGTTAACAATTGGTGGTACAACAATGTTTACTATGGTTACTGCTGTTATTATTTTGCCTACTGTTTTGTTGGAGGATATCAGTTTGTTGTCTTATGTGTCTGTTGGTGGTGCTTTAGCTTCTTCAATTTTCATCTTTTCTTTGTTGTGGAATGGTGCTATTGATGGAACAGGTTTTGATGGAAAAGGAAAATTTTTTATATTCAGTGGAATACCTTCTGCTGTTAGTTTGTATGCTTTTTGTTATAGTGCTCATCCAGTTCTTCCTACACTCTATAATTCTATGAGGAACAAAACTCATTTCTCAACTGTCCTGTTACTAAGCTTTTTAGCATGCACACTTGGTTATGCAGCAGCAGCAATACTAGGCTACTTAATGTTTGGAGAAGATGTTGAATCACAAGTAACTCTAAATCTTCAAACAGGAAAGTTAAGTTCACGTGTTGCAATATACACAACCTTAGTGAATCCAATAGCAAAATATGCATTAATGCTTACACCAGTTATAAATGCAATTAAAATGAAAATTTCATGCAATTATTTCAACAAAAGGGTCACACACATGATTATTAGTACATCTTTATTAGTAACTTCTCTTATTATAGCAGTGACTATTCCTTTATTTGGTTACCTTATGTCACTTGTTGGAGCATTGTTAAGTGTGTCAGCTTCAATTTTGGTGCCAACAGTTTGTTACTTGAAGATTTCAGGAGCTTATAAGAGATTTGGATTTGAAATGATTATTAATTATTTGATCATTGTAATGGGGGTAGCTATTGCTGTTTTTGGTAGTTATAGATCTATTGTGGATATAATTCAAAATTTGTACTTAGAATGA 1323 0.3379 MAAEQGGRFSSIEVPLLNDEKVYHVNSSNEAVTKIKEQQHQTVHVGNASLFKTGFHLVNAISGVGIVSIPYALASGGWLSIILLFIIAIACCYTGTLVKKCMDMDLEIRTFSDIGQHAFGNKGRLIVSIIMNSELYLAVTGFLILEGDNLNKLVPNMEIHLPWLTIGGTTMFTMVTAVIILPTVLLEDISLLSYVSVGGALASSIFIFSLLWNGAIDGTGFDGKGKFFIFSGIPSAVSLYAFCYSAHPVLPTLYNSMRNKTHFSTVLLLSFLACTLGYAAAAILGYLMFGEDVESQVTLNLQTGKLSSRVAIYTTLVNPIAKYALMLTPVINAIKMKISCNYFNKRVTHMIISTSLLVTSLIIAVTIPLFGYLMSLVGALLSVSASILVPTVCYLKISGAYKRFGFEMIINYLIIVMGVAIAVFGSYRSIVDIIQNLYLE 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01310 440 Pfam Transmembrane amino acid transporter protein 47 430 IPR013057 -
Car05g01310 440 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 1 435 - -
Car05g01310 440 PANTHER OS05G0424000 PROTEIN-RELATED 1 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01310 Car-Chr5 56951730 56956485 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01310 36 434 Amino Acid or Auxin Permease AAAP Family AT3G28960 53.133 1.41e-146 422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01310 K15015 - gmx:100784690 612.068