Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01309 ATGAATGAAGTGTGGAGATTCATAATGTTCTGCCGCATGGTGCTTGTAATTGGGGTGATGGTGTCTTTCTCTTTGAGCATGAAACAGGGTCAGTGTTTGACTCTCAACACCCAAGGGTTGGCACTTTTAAAGATGAAGGAGAGGGTGGTGAGAGATTCATTGGGAGCTTTAATGAAATGGAAATGGAATGGTGAAGAAGGAGTCAATGTGGCCTTGCACATTGGCCAACAAGGGGATCATATACAATACATGAGAAAACTTCTACAATCAGTAAATTCTGCTAACTCACACAAAACCAAAAAGGGTGATGAAAAAAACAATCTTtcatcaacaccaccatcttcatcaccattttctaaacatgtttcaccatcaataagtccttcaaattcaccatcaccatcatTTTTGATTCCATCACCATTAAGTTCACCAGAAGTTTCACCTTCACCTGTGGTAGCACCAATTCAACACTTAACACTCATATCAGATCCACCTACAGATGTATCCACACCACAACAATCTAATTGGATTTCAGCACCTTCCCCTGCAACATCTTCAAACCAAGATAATTCAAACACTTCAAAAAACCAAAAGCAACATTCTGTGATTGTATGGTCAACAGTTGGAGGCTTCTCCTTGTTGGTTTTGGTGTCATTCACTGTTTTTATTTGCTTCAGAAGTAGTAAGGTTGTAACTGTGAAACCTTGGGCTACAGGGTTGAGTGGCCAGCTCAGAAAAGCATTTGTAACAGGTATTCCAAGTCTTAAAAGAGGTGAACTTGTAGTGGCTTGTGAAGATTTCAGCAACATTATTGGTTCTCTTCAAGATGAAACTATCTATAAGGGAACTCTTTCTAGTGGAGTTGAGATAGCTGTAGTATCTTCTGCAGTAACTTCATCCAAAGATTGGTCAAAAAATATGCAAACTCAGTTCAGAAAAAAGATTGAGATGTTGTCAAGGATAAACCACAAGAATTTTGTTAATCTTATTGGCTATTGTGAAGAGAATAAGCCATTCACAAGGATGATGGTTTTTGAGTATGCTCCTAATGGGACATTGTATGAGCATCTACATATTAGAGAAACAGAAAAACTGGATTGGGGAATGAGAAAGAGGATAGCTATGGGAATATCCTACTGTCTAGAGTACATGCATCAGCTAACACCACCCATTGCTCAGAGAAACCTCCTATCTTCCTCTATATACCTAACCGAAGATTACGCTGCTAAAGTATCCGACCTAGGTTTCTGGAGGGACATAGTTGATATAAAGAAGGGTTCTGATATCAACTACGTCACTCCAGAAACCAAGGACAATGTCTATAGTTTTGGTGTAATATTGTTTGAATTGATAACAGGGAAAATTCCTTTTGCTGTGGATAATGGCTTTCTTACAGATTGGGCTGCAGAATATATAAGAGGACAACCTTTGAGAGATTTGTTGGATACAAGCTTGATGAACTGTTTGAAAGAAGATGAAGTTGAGAAATGGTCAGAAGTGATTAATGATTGTGTAAATCCTGATCATGAAAAAAGGCCATCAATGAAAGAGGTTACAAAAAAGTTGAAGGAAATCACTTCTATGGAGCCTGATGGAGCAACTCCAAAATCATCACCTCTTTGGTGGGCAGAAATTGAAATTATGTCCTCAGACTTATGA 1662 0.367 MNEVWRFIMFCRMVLVIGVMVSFSLSMKQGQCLTLNTQGLALLKMKERVVRDSLGALMKWKWNGEEGVNVALHIGQQGDHIQYMRKLLQSVNSANSHKTKKGDEKNNLSSTPPSSSPFSKHVSPSISPSNSPSPSFLIPSPLSSPEVSPSPVVAPIQHLTLISDPPTDVSTPQQSNWISAPSPATSSNQDNSNTSKNQKQHSVIVWSTVGGFSLLVLVSFTVFICFRSSKVVTVKPWATGLSGQLRKAFVTGIPSLKRGELVVACEDFSNIIGSLQDETIYKGTLSSGVEIAVVSSAVTSSKDWSKNMQTQFRKKIEMLSRINHKNFVNLIGYCEENKPFTRMMVFEYAPNGTLYEHLHIRETEKLDWGMRKRIAMGISYCLEYMHQLTPPIAQRNLLSSSIYLTEDYAAKVSDLGFWRDIVDIKKGSDINYVTPETKDNVYSFGVILFELITGKIPFAVDNGFLTDWAAEYIRGQPLRDLLDTSLMNCLKEDEVEKWSEVINDCVNPDHEKRPSMKEVTKKLKEITSMEPDGATPKSSPLWWAEIEIMSSDL 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01309 553 MobiDBLite consensus disorder prediction 106 133 - -
Car05g01309 553 ProSiteProfiles Protein kinase domain profile. 266 526 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g01309 553 MobiDBLite consensus disorder prediction 163 198 - -
Car05g01309 553 Pfam Protein tyrosine and serine/threonine kinase 271 523 IPR001245 GO:0004672|GO:0006468
Car05g01309 553 MobiDBLite consensus disorder prediction 94 142 - -
Car05g01309 553 PANTHER PROTEIN MALE DISCOVERER 2 1 73 - -
Car05g01309 553 PANTHER PROTEIN MALE DISCOVERER 2 101 551 - -
Car05g01309 553 SUPERFAMILY Protein kinase-like (PK-like) 253 523 IPR011009 -
Car05g01309 553 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 101 551 - -
Car05g01309 553 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 1 73 - -
Car05g01309 553 Gene3D Phosphorylase Kinase; domain 1 244 348 - -
Car05g01309 553 Gene3D Transferase(Phosphotransferase) domain 1 349 537 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01309 Car-Chr5 56942840 56947590 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01309 248 530 Receptor kinase-like Gene Family AT1G67720 34.211 9.08e-41 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Car05g01309 PK_Tyr_Ser-Thr 5.7e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01309 - - var:108343001 660.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01309 05 56942840 56947590 Car05g01309 05 56942840 56947590 ECH