Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01306 ATGGAAGGAAATATCCCTGCCACATTCTCACATATGAATCCATCTAAACCCTCTTTGAGTCCTACTAATTCACTATTTCAAGCACATATGAGGGTTGTGAACACTCCAACTAATGGTGCACTTTGGGGTGCTACCACCGATATTGATGATTTTGGTTCCAAATTTAATCAAGCAGAACCATCAAGAGTCAATTTGGGTCTTAATTGTGACCAAGACATGGATCCTAAGAAGATTCGAAAACTCATGCTGAAACGTCTTGCTTCTAAGAGATCAAGATTGAGGAAAAAGATGTATGAGGCCAATTTGGAAATGAAAGTTAGAGAAATTGAGGCTCAAATAGTTGAACTAAAATCACAACTTCAAGTGCAACCTAATCACAAGCGCTTATTGGTTTTGGAACAAGAGCTATTAACTCATCGAATCAACATTGTTGAGCAAGAAATGTTTCTCAAAGAAGCTGTAACTGAGGAACTAATGGCTCAAACGAATGTATTGAATGAACTCTATGCAATGCAACACGAGCCACAAGAACAGATGCTTGATTGGAACATTAATAATAATGTGGAGCCAATTTCTTATGATCCAATGGAAAATTATTATTCAAATCCATATAATCAAGATACTGAATTACCATTGCAAAGGCAAATGTTGACACCTACTCTCCCCACAGACGAGTATGAAACAAATGTGATTGATCAGCCTAACAACAAAAGCATGGGAATGATGGAGATTAAATGGCATCCTCATTTTAACAATGATCAATTCATCTGA 771 0.3684 MEGNIPATFSHMNPSKPSLSPTNSLFQAHMRVVNTPTNGALWGATTDIDDFGSKFNQAEPSRVNLGLNCDQDMDPKKIRKLMLKRLASKRSRLRKKMYEANLEMKVREIEAQIVELKSQLQVQPNHKRLLVLEQELLTHRINIVEQEMFLKEAVTEELMAQTNVLNELYAMQHEPQEQMLDWNINNNVEPISYDPMENYYSNPYNQDTELPLQRQMLTPTLPTDEYETNVIDQPNNKSMGMMEIKWHPHFNNDQFI 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01306 256 Coils Coil 83 119 - -
Car05g01306 256 PANTHER - 23 236 - -
Car05g01306 256 CDD bZIP 77 121 - -
Car05g01306 256 MobiDBLite consensus disorder prediction 1 21 - -
Car05g01306 256 Pfam Basic region leucine zipper 85 121 IPR004827 GO:0003700|GO:0006355
Car05g01306 256 Gene3D - 75 125 - -
Car05g01306 256 SUPERFAMILY Leucine zipper domain 76 129 IPR046347 GO:0003700|GO:0006355
Car05g01306 256 PANTHER BASIC LEUCINE ZIPPER 34 23 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01306 Car-Chr5 56922034 56924282 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01306 38 223 bZIP Transcription Factor Family AT1G43700 25.641 3.32e-09 54.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Car05g01306 bZIP_2 6.3e-06 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01306 - K15302 cam:101503209 506.138