Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01305 ATGGAAGGCCAAGGAAACATCTTTCAGATGAATTCAGCAAAACCACCTTTGAATTTTAGTTCATCATTTCAAGCACACATGGTGGAGAATCCTCCAACTAATGGTGCACCTTGGATTAATGCTACCATTGACAAATCTAATGGAGCAAAAACCAATTTGGGTCTTAATTATGACCGAAACGTGGATCCTAAGAAGATCAGACGTATCATGGCTAATCGAGACTCTGCTCAGAGGTCAAGATTGAGGAAAGTGTTGTATGTAAAAGATTTGGAAATGAAAGCCAAAGAATTTGAGGGTCAAATAGCTGAGGATCTTCGACCACAACTTGCGTTATTAAAAGATGAAAAGCACTCTTTGTTGTTGGAAAATGAGACATTGACACATCGATTGAACATTCTTCAGAAAGAAGCACTTCTTAAAAACGCTGAAATTGAAGAAAACACAATTGAAGTGAAGAAACTGAGGGAAGAATATAACAAGCTACAAGAACAACGAGAACTAATGCTTAATTGGAATAACACTAATGTGCAGCCAATGTCCAATGATCCATTATTCTCAAATTATTCTTCAAATCCATATGGTCAAGATAGCCAAATGTGGACACCGACTGTGGCGGATAAGCGTGAAACAGAACTGGGTGATCTTCCCAGCAGCATGGATTTGATGAATATCAATTATGAAGATCCTAAGAAGTTTCAATGA 702 0.3775 MEGQGNIFQMNSAKPPLNFSSSFQAHMVENPPTNGAPWINATIDKSNGAKTNLGLNYDRNVDPKKIRRIMANRDSAQRSRLRKVLYVKDLEMKAKEFEGQIAEDLRPQLALLKDEKHSLLLENETLTHRLNILQKEALLKNAEIEENTIEVKKLREEYNKLQEQRELMLNWNNTNVQPMSNDPLFSNYSSNPYGQDSQMWTPTVADKRETELGDLPSSMDLMNINYEDPKKFQ 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01305 233 SUPERFAMILY Leucine zipper domain 64 118 IPR046347 GO:0003700|GO:0006355
Car05g01305 233 Pfam bZIP transcription factor 64 123 IPR004827 GO:0003700|GO:0006355
Car05g01305 233 PANTHER - 37 226 - -
Car05g01305 233 Gene3D - 63 170 - -
Car05g01305 233 Coils Coil 116 136 - -
Car05g01305 233 Coils Coil 144 171 - -
Car05g01305 233 CDD bZIP_plant_RF2 65 116 IPR044759 GO:0003700|GO:0006355
Car05g01305 233 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 67 82 IPR004827 GO:0003700|GO:0006355
Car05g01305 233 SMART brlzneu 60 125 IPR004827 GO:0003700|GO:0006355
Car05g01305 233 PANTHER BASIC LEUCINE ZIPPER 34 37 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01305 Car-Chr5 56912277 56914496 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01305 39 162 bZIP Transcription Factor Family AT1G43700 34.884 2.29e-13 66.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Car05g01305 bZIP_1 3.1e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01305 - - cam:101503209 171.4