Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01303 ATGATCGAGAGAGTGAAATTCAAGTTGTATCCAATGGAAAAAGAAAAAATGCAGGACTTCACAAAGAGAACAATTTTTAGAGACGTGTTGCAACTAGAAGAGAAAACAGGGCCCAAAAATCTCAACAATGTTAGACCATTTTTACAAAGTGGTTCAGCATTTCGACCATGGCAGCCCTCATGGAAGATTGACATTAATAAATCATCAGAGGCAAGTAGCAGTGTGGAAAAGCCATATCATCGTCCTCAAAATTTCAATAAAACAATTACAGCAGACTACAATAATAATAACATGAACATAGAAAATTCAAATATTGATGGGGTCCAGAAAAACCCCATTGATAGTGGGAGTACAACTTCAGTTATAGGTGATGGTGACGTCAATGGGATCATTGTACGAACTGACGAAGTCCAATTTGACTCGGAATGCAATACTCAACGCGAATTGGATCCTAAGAGACTCAAACGAATCCTAGCAAACAGAGCTTCGGCACAAAGATCCAGAACAAGAAAAAATGAGTATATTGCAGATTTGGAACGGATGGAAAAAACTTTTCAGGATAAGATATCTTTCCTTCATCGACAAATTGAAGCCTCTAGAGGCCAACATTGGTTAATGCAGCTTGAGCACCACCAATTGAAACTCAAAATGGCTGTTCGTGAAAAAGAACGAGTAATTCAAGAAATGGAGATTGAAAAGATTAAAGCTGAGGTTTATAGGCTGAGTGAGCTTCAGAAGAAACAAATAGTTGAAACACAAGCAATGATGCACAACATGGGTTCCACCATACAATTTATGTCTCATTCAGACGTTAATAATCCTCCTGCCTTTGAAGGATTGGTTTGCCAGATCCCAAATCAAGCTCAAAATGGAATAGAAGCATCAACCATATTGCAAAGTGAGACTACTAAGTCCAAAGCAGCAAAATCAGCAGGGACAGACATGGACGGGTAA 954 0.3857 MIERVKFKLYPMEKEKMQDFTKRTIFRDVLQLEEKTGPKNLNNVRPFLQSGSAFRPWQPSWKIDINKSSEASSSVEKPYHRPQNFNKTITADYNNNNMNIENSNIDGVQKNPIDSGSTTSVIGDGDVNGIIVRTDEVQFDSECNTQRELDPKRLKRILANRASAQRSRTRKNEYIADLERMEKTFQDKISFLHRQIEASRGQHWLMQLEHHQLKLKMAVREKERVIQEMEIEKIKAEVYRLSELQKKQIVETQAMMHNMGSTIQFMSHSDVNNPPAFEGLVCQIPNQAQNGIEASTILQSETTKSKAAKSAGTDMDG 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01303 317 CDD bZIP_plant_RF2 153 203 IPR044759 GO:0003700|GO:0006355
Car05g01303 317 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 155 170 IPR004827 GO:0003700|GO:0006355
Car05g01303 317 Coils Coil 208 228 - -
Car05g01303 317 PANTHER BASIC LEUCINE ZIPPER 34 75 278 - -
Car05g01303 317 Coils Coil 164 184 - -
Car05g01303 317 Pfam bZIP transcription factor 152 198 IPR004827 GO:0003700|GO:0006355
Car05g01303 317 SMART brlzneu 148 219 IPR004827 GO:0003700|GO:0006355
Car05g01303 317 PANTHER ACTIVATOR OF SPOMIN LUC3 75 278 - -
Car05g01303 317 Gene3D - 152 201 - -
Car05g01303 317 SUPERFAMILY Leucine zipper domain 152 206 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01303 Car-Chr5 56862185 56866647 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01303 147 228 bZIP Transcription Factor Family AT2G42380 41.463 2.19e-13 67.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Car05g01303 bZIP_1 5.5e-07 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01303 - - cam:101502562 220.705