Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01294 ATGGAATTCAACAAGTTCAGAATCAGAAGCTATGAGGGTCAATTTGATAGAGCTCAAGTTGAAAATCTAGAGAGAAAATGTGAGGTAGGACCATCAGAAAGTGTGTTTCTCTTCACAGACACTATGGGTGACCCCATTTGTAGGATCAGAAACAGTCCCATGTACATGATGCTGGTAGCTGAATTGGAGAATGAATTGGTTGGTGTCATTCAAGGCTCTATAAAACTAGTCACTATTCAACACCATCCACCAAAGGATTTAGCAAAAGTAGGGTATGTCCTAGGCTTAAGGGTATCACCACATCATAGAAGAAAAGGGATTGGCTCAAACCTAGTAAGAAGATTAGAAGAATGGTTCATTTCAAATGATGTGGACTATGCATATATGGCAACAGAGAAAGAAAATAATGCCTCAGTTAATCTTTTCATGAAAAAATTTGGTTACACAAAGTTTAGGACACCATCTATTCTTGTTAACCCTGTGAACCATCATTCACTTCAAATTTCATCCAACATTGAGATATCAAGATTGAAAATTGAAGAAGCTGAATCACTCTATAAAAGGTTCATGGGGTCCACAGAGTTTTTCCCTAATGATATAGGAAATATTTTAAGGAATAAGTTAAGTTTAGGGACATGGATGGCATATTTTAAAGGTGATGTTGGGTCTAATGGATCACAAGTACCAAATAGTTGGGCTATGCTTAGTGTATGGAATAGTGGTGAAATTTTCAAGTTAAGATTAGGAAAAGCACCTTTTTGTTGTTTGTTATACACAAAAAGTTGGTGCTTGATTGATAAAATTTTCCCATGTTTAAAATTGCCAACTTTGCCTGATTTTTTTAACCCTTTTGGATTTTATTTCATGTATGGTTTGTATCATGAAGGACCATTGTCTGGGAAGCTAGTGAGAGGTTTGTGTCAATTTGTGCATAACATGGCTGTTGAGTCTAATGATGATGAGAAGTGTAAGATTATTGTGACTGAAGTTGGAGGAAGAGATCAACTCAATCAACATATTCCACATTGGAAATTGCTCTCATGCCCTGAAGATTTGTGGTGCATAAAGGCATTGAAAAATGAAGGGCTATCATCATCAATCAATACTTTTCATGAATTAATCAAAACAACCCCACCAACAAGAGCTCTTTTTGTAGACCCTAGAGAGGTTTAA 1173 0.3615 MEFNKFRIRSYEGQFDRAQVENLERKCEVGPSESVFLFTDTMGDPICRIRNSPMYMMLVAELENELVGVIQGSIKLVTIQHHPPKDLAKVGYVLGLRVSPHHRRKGIGSNLVRRLEEWFISNDVDYAYMATEKENNASVNLFMKKFGYTKFRTPSILVNPVNHHSLQISSNIEISRLKIEEAESLYKRFMGSTEFFPNDIGNILRNKLSLGTWMAYFKGDVGSNGSQVPNSWAMLSVWNSGEIFKLRLGKAPFCCLLYTKSWCLIDKIFPCLKLPTLPDFFNPFGFYFMYGLYHEGPLSGKLVRGLCQFVHNMAVESNDDEKCKIIVTEVGGRDQLNQHIPHWKLLSCPEDLWCIKALKNEGLSSSINTFHELIKTTPPTRALFVDPREV 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01294 390 Pfam Acetyltransferase (GNAT) family 47 148 IPR000182 GO:0016407
Car05g01294 390 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 6 173 IPR000182 GO:0016407
Car05g01294 390 Gene3D - 14 153 - -
Car05g01294 390 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 1 390 - -
Car05g01294 390 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 8 152 IPR016181 -
Car05g01294 390 CDD NAT_SF 57 128 - -
Car05g01294 390 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 1 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01294 Car-Chr5 56679515 56681528 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Car05g01294 Acetyltransf_1 5.4e-17 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01294 - - gmx:100799507 686.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01294 05 56679515 56681528 Car05g01294 05 56679515 56681528 ECH