Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01291 ATGCAACCACAATCTAATTCTAACTCACCCATCAAACCAATGAACTCACTCACTCAATTTTTTCAAAACATTTTCTCAGATAACAGCAACATAATGTTAGCTGCTATAATTTCCTTATTACTTGTCATTCTCTTTGTTCTTCTCCTTCATCTTTATGCCAAATGGTTCTTAGCACAAGCACATTCACAAGCACAAGCTCGTCGCCGCCGTCGTCGGAGAACAACCGTAACCGTCTCCGATGTCTTAGGTCCTGCAAGGTTCCACCATTTTCACAGCTTCAACATTGAAGACTCACCACTTTCTACAAAGGGTCTTGATTCTTCCATCATTGCTTCCATTCCTCTGTTCATTTATGCAGAGGAAAATAGCAATGATGAAATGAAACAAGAACTTGAATGTGTGATTTGTTTGAGTGGTTTTGAAAATGGTGAAATGGGAAGGTGTTTGCCAAAATGTGGACATGGTTTTCATGTTGAGTGTATTGATATGTGGTTGATTTCACATTCTAATTGTCCTATTTGTAGAGCTCCAATTGTTCATGATTCTTCTTCAAGtgttgttgttgttgatgatgatgattctagttttgttgAAATTGTGATTGATGAAACTACAAGTTCTGAGGTTAGAGAAAGTGAACAAGGGAATGGTAATAATAATGGAAGTGTGGTAGTGAGTGATTCTGTTTCTGAAACTTCTTCTTCTTTGTTTGGTTGCTCTTTGAAGACAGTGTTCAGCAAAGTTTTTAAATCTTGTAATGTAAATGAATCACAT 774 0.3527 MQPQSNSNSPIKPMNSLTQFFQNIFSDNSNIMLAAIISLLLVILFVLLLHLYAKWFLAQAHSQAQARRRRRRRTTVTVSDVLGPARFHHFHSFNIEDSPLSTKGLDSSIIASIPLFIYAEENSNDEMKQELECVICLSGFENGEMGRCLPKCGHGFHVECIDMWLISHSNCPICRAPIVHDSSSSVVVVDDDDSSFVEIVIDETTSSEVRESEQGNGNNNGSVVVSDSVSETSSSLFGCSLKTVFSKVFKSCNVNESH 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01291 258 SMART ring_2 133 174 IPR001841 -
Car05g01291 258 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 12 253 IPR044675 -
Car05g01291 258 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 88 180 IPR013083 -
Car05g01291 258 CDD RING-H2_EL5_like 132 175 - -
Car05g01291 258 Pfam Ring finger domain 132 175 IPR001841 -
Car05g01291 258 SUPERFAMILY RING/U-box 114 181 - -
Car05g01291 258 ProSiteProfiles Zinc finger RING-type profile. 133 175 IPR001841 -
Car05g01291 258 PANTHER - 12 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01291 Car-Chr5 56637385 56638162 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01291 23 220 Rapid Response to Elicitors AT3G16720 34.135 7.14e-33 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01291 - - lang:109329145 286.574
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01291 05 56637385 56638162 Car05g01291 05 56637385 56638162 ECH
Car05g01291 05 56637385 56638162 Car02g01365 02 39945160 39946119 PCT