Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01276 ATGATCCAGCTTTTAGAAGGTGTGAAGTATCTTCATGACAACTGGGTGCTTCATAGGGATGTGAACACTTCAAACCTGCTTCTAAATAACAGGGGTGAGCTAAATATTTGTAATTTTTGGTTGGCTCGCCAATATGGGAGTCCTTTGAAACCGTATACTCACCTGGTGGTTACTCTTTGGTACAGGTGCGGCTGCTCCACTCCGTCGCGGTCTCATGAACTGAACTTCGTTGCCTTCCCGCGCGCGAAGCGAATGGGCGCTGTGCGGTGGGTCAGTTTTGGGGCGGGGAGCGAAGATAGAGCATTTTGCATGCTCTGGAATGATTTTGGAGGTATTAAAGAAATTGTGGAAGGAAGAGGAGAAGTTGTTGAAAGAGGAGGGGTACTTTCACGAGGCAAATCTTCTCCTCGAGGATATCTCCCATCATCGAAGAGCACGTTGGGATTAGAAAAACCATGA 459 0.4749 MIQLLEGVKYLHDNWVLHRDVNTSNLLLNNRGELNICNFWLARQYGSPLKPYTHLVVTLWYRCGCSTPSRSHELNFVAFPRAKRMGAVRWVSFGAGSEDRAFCMLWNDFGGIKEIVEGRGEVVERGGVLSRGKSSPRGYLPSSKSTLGLEKP 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01276 152 SUPERFAMILY Protein kinase-like (PK-like) 1 63 IPR011009 -
Car05g01276 152 MobiDBLite consensus disorder prediction 127 152 - -
Car05g01276 152 ProSiteProfiles Protein kinase domain profile. 1 152 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g01276 152 Gene3D Transferase(Phosphotransferase) domain 1 1 62 - -
Car05g01276 152 Pfam Protein kinase domain 1 62 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g01276 152 PANTHER - 1 63 - -
Car05g01276 152 PANTHER CELL DIVISION PROTEIN KINASE 1 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01276 Car-Chr5 56372364 56374868 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01276 1 63 Core Cell Cycle Gene Families AT2G38620 50.000 4.52e-15 68.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-PITSLRE Car05g01276 Pkinase 3e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01276 K08818 - sspl:121772200 124.405