Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01274 ATGAAACCATCAAGTACTCCAACTTCATTAACTTATTCAAATGTATCTCCATCAACTTCATCCAACACCCCAATGTGTAGCAGCTCTAAAACCACAACTACAGGGTGTTTCACATCCATCATGCGCAAGATTCTCTGCTCTGAAAACCTTCCAAAAGACCCatcaaatcaaatcacacaacttgattcaacaaattcaattctaagtgaaaaagatcaaaACTTGAACACTGTGGCTTTTACAACTCCTCCTTCAATAGTAGCAAGGTTAATGGGTTTGGAATCAATGGTGGAGACACACTTTGCATCAAAACAAGGTTCACTTTCACGTAGCAAATCAATGAATTCTATGGACTATTTTCAGAGTTTGCATAAGAAGAGGGTTGATTCAACATTGTCTTTTAGAGAACCCCCAAGTTTTAAAGTGATTGAAAATGAGAACTTTTTTGTTTTAAGTTTTGAAAATGAAGGTGAGAATGGGAGAAGAAAGCAAATGGTCTGTTCAGAAATGATGAAAAAAGTTGAAATTGAAAGTGTTTTTGATGAGAAGAGGAAAATGAGCAAAAGGGTAGTTTCTGATTCTGATATATCGTGTGAAAATGATGGAAATCGTTGTAATAATAAGTTTCAAGATGTCACCAACACTTTGCATCAGTTCAATGATTCATCTGAAAAGAAGTGTTTTGATTCAGAAGGAGTTGAATTGTTGAAGCCTAAGTATTGCAATGAAGTTTTGATTGGTgaaaagttgaagaagaggagaaggaggaggaagaagagaaCAAAATGTTACATATATAACAAGATAGAAACTGAATTCAAATCAGATGATTCAAGTCCTGTTTCTGTTCTTGAATTTGAACGCAAATCTTGTGTAGCAGTTGGTTTGAGTTCAAGAAGAAAGTTGACACCAGAGCTTGAAAATGACAAGCTCATTCTTGATCGTTCAGATGATAATTTGATGATTAATGAGAAGAAGGGTAATGCAATTGAGAACAACAAATATGAAGATTCAAAGGAGAAAAAGCACATGAAAGAGTATAAAGATATTTGGGGTGAAACATGGAGGCTTGTTCAAGATGAATTTGGTGGATCAAATCAAGTTCATGCATGGATGAATGAACAAAGTGATTTAGGAAGCATATGTGCTGAATTTGAGTCAGAAATTTTTGATCAATTGTTGAATGAGGTGGTGATATGTCAACTTGTTGGGTAA 1215 0.3218 MKPSSTPTSLTYSNVSPSTSSNTPMCSSSKTTTTGCFTSIMRKILCSENLPKDPSNQITQLDSTNSILSEKDQNLNTVAFTTPPSIVARLMGLESMVETHFASKQGSLSRSKSMNSMDYFQSLHKKRVDSTLSFREPPSFKVIENENFFVLSFENEGENGRRKQMVCSEMMKKVEIESVFDEKRKMSKRVVSDSDISCENDGNRCNNKFQDVTNTLHQFNDSSEKKCFDSEGVELLKPKYCNEVLIGEKLKKRRRRRKKRTKCYIYNKIETEFKSDDSSPVSVLEFERKSCVAVGLSSRRKLTPELENDKLILDRSDDNLMINEKKGNAIENNKYEDSKEKKHMKEYKDIWGETWRLVQDEFGGSNQVHAWMNEQSDLGSICAEFESEIFDQLLNEVVICQLVG 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01274 404 PANTHER OS05G0128300 PROTEIN 27 398 - -
Car05g01274 404 MobiDBLite consensus disorder prediction 1 30 - -
Car05g01274 404 Pfam DUF761-associated sequence motif 83 96 IPR032795 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01274 Car-Chr5 56320545 56322031 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01274 276 398 TRM (TON1 Recruiting Motif) Superfamily AT5G58630 31.008 1.01e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01274 - - mtr:MTR_3g464300 441.425