Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01261 ATGTTGTCATTTCCTTTTATTCCCATTTATCACCACACACGCACACAATACACTCTCATGGAAGTTTCATGGGAACAAAGTGTCACCTATTCTATAAACACAATCTACCTTCTTTTCTCTGCCTACTTAGTCTTTGTAATGCAATTAGGCTTTGCCATGATATGTGCAGGTTCTGTGAGAGCCAAAAATGCCATGAACATAATGCTAACCAATGTAGTTGATGCTGTGGTAGGTAGCATTTCCTTCTACCTTTTTGGTTTTGCATTTGCATATGGTAATTCCAACTCTTTCATTGGTACCAATTTGTTTGCTTTGGCTAATATTCCAAATGAAAATTATGACTATGGATTCTTCCTTTATCAATGGGCTTTTGCTATAGCTGTAGCTGGCATCACTAGTGGGTCCATAGCTGAGAGAACCCAATTTAGTGCTTATCTTGTTTTTTCATTTTTTCTTACTGGGTTTGTTTACCCAGTTGTGGCCCATTGGGTTTGGTCTTCTAGTGGTTGGCTTAGTCCCAATTCAAGTCACTTATTATTGGGCTCAGGTGCCATTGACTTTGCTGGGAGTGGAGTGGTGCATTTGGTTGGTGCAATTGCCGGACTCTGGGGATCGATTATAGAAGGCCCACGGGTTGGGCGGTTTGACGCTTATGGAAAGCCCGTTCCTCTCCGCGGCCACAATGCCACACTTGTGGTTCTTGGGACGTTCTTGTTGTGGTTCGGTTGGTTCGGGTTTAACCCTGGTTCATTTGATCGAATTCTCGTGCCCTACCCTGGCACGTCTGATCAAGGTAATTGGACTTCAGTGGGCCGGACTGCTGTGACAACCACATTAGCAGGCTCGACCGCTGGAATCGTCACCTTGTTCGGACGTCGGTTATTAATTGGTCATTGGGATGCAATGGATGTTTGCAATGGTTTGCTTGGTGGGTTTGTTGCCATCACCTCTGGGTGCTCAGTTGTTGAGCCATGGGCCGCTATTCTATGCGGATTCGTCGCAGCTTGGGTATTGATTGGGCTCAATATCTTGGCACTAAAATTGAACTATGATGACCCATTAGAGGCAGCCCAATTACATGGTGGGTGTGGCACTTGGGGTTTGTTGTTTACAGGGTTGTTTGCCAAAAAGGAGTTTGTGATTCAAGCCTATAATTCAGGGGTGGTAGTGAAAAGACCATATGGTCTTCTACTTGGTGGTGGATGGGGATTAATTGGAGCTCAAATGGTTGAGATTTTGGTAATTTTTTTATGGGTTAGTATAACAATGGGCCCTATGTTCTATGCCTTGCACAAGCTCAATTTACTTAGAATTCATGTGGATGATGAACTTGCTGGCCTTGATATATCAAGCCATGGAGGCTATGCTTATGCTGCTCAAGAGGATCATCAACCTCGATCTTATAAAGATTATATGCGAATGCAAGATGACCAATCATAG 1440 0.4382 MLSFPFIPIYHHTRTQYTLMEVSWEQSVTYSINTIYLLFSAYLVFVMQLGFAMICAGSVRAKNAMNIMLTNVVDAVVGSISFYLFGFAFAYGNSNSFIGTNLFALANIPNENYDYGFFLYQWAFAIAVAGITSGSIAERTQFSAYLVFSFFLTGFVYPVVAHWVWSSSGWLSPNSSHLLLGSGAIDFAGSGVVHLVGAIAGLWGSIIEGPRVGRFDAYGKPVPLRGHNATLVVLGTFLLWFGWFGFNPGSFDRILVPYPGTSDQGNWTSVGRTAVTTTLAGSTAGIVTLFGRRLLIGHWDAMDVCNGLLGGFVAITSGCSVVEPWAAILCGFVAAWVLIGLNILALKLNYDDPLEAAQLHGGCGTWGLLFTGLFAKKEFVIQAYNSGVVVKRPYGLLLGGGWGLIGAQMVEILVIFLWVSITMGPMFYALHKLNLLRIHVDDELAGLDISSHGGYAYAAQEDHQPRSYKDYMRMQDDQS 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01261 479 PANTHER AMMONIUM TRANSPORTER 20 476 - -
Car05g01261 479 TIGRFAM amt: ammonium transporter 33 457 IPR001905 GO:0008519|GO:0016020|GO:0072488
Car05g01261 479 ProSitePatterns Ammonium transporters signature. 186 211 IPR018047 GO:0008519|GO:0016020|GO:0072488
Car05g01261 479 PANTHER AMMONIUM TRANSPORTER 1 MEMBER 3 20 476 - -
Car05g01261 479 Pfam Ammonium Transporter Family 37 457 IPR024041 GO:0008519|GO:0016020|GO:0072488
Car05g01261 479 Gene3D Ammonium transporter AmtB like domains 11 475 IPR029020 -
Car05g01261 479 SUPERFAMILY Ammonium transporter 30 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01261 Car-Chr5 56036049 56037661 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01261 26 464 Inorganic Solute Cotransporters AT1G64780 67.489 0.0 608
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01261 K03320 - jre:109009016 794.653
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01261 05 56036049 56037661 Car05g01261 05 56036049 56037661 ECH